Pseudomonas cannabina pv. alisalensis: JGS08_25630
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Entry
JGS08_25630 CDS
T07379
Name
(GenBank) terminase
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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GFIT
Motif
Pfam:
Terminase_6N
Terminase_6C
DUF3456
OB_DEPS-1_3rd
Motif
Other DBs
NCBI-ProteinID:
QQN21890
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Position
5732330..5734384
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AA seq
684 aa
AA seq
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MYYSTEVKEAAKRLFLRRHKAKEIQAQLNLPNIRIVYHWIRVGGWEDMLTDEEPLTAVSR
RITLLLEKADSLTKGDLDELDRLTTVRERLAKQCAKPAAMPVRDEQSNDGHRRDDERGER
RERGKRDGKKREKKVKNDVSELREVDFLDKFISKMYGYQKELFAAKQNPLNARIRNILKS
RQVGLTYYFAGEAFMDAVLTGDNQVFLSASRAQSEIFRSYIIAFAQAWFGLELTGNPIVL
SKDGKPWAELRFLSTNSSTAQGHHGHVYVDEYFWIRDFEKLNTVASAMATHKKWRKTYFS
TPSAVSHQAYPFWQGEKFRNSKRKAAKDPWPSDKQISAGALCPDGQWRKVITILDAIAGG
CDLFDLEQLQLEYDDDKFQQLFMCKFIDSSQSAFSLADLERCYSDLSLWADFDPDDPRPY
GNSPVWIGYDPSRTRDDATCVVIAPPLENGGKFRILEKHSWRGQSFKYQAEQVKKLTERF
NVQHIGIDTTGIGYGVFDMVRDFYPRATSIHYSLETKNLLVLKAQDTIQGSRIEWDAGWN
DIAQAFLTIKRGTTGSGQVTYSASRTDATGHADVAWAIMHALQYEPLNTDKKRRSSYALT
GSTSHGKTQNPAAGKTGPAAHARVHVRCAGIGIDRQHRAVPGRVRQRRRTCLYAASVAQG
VGKAAQSQCAPRRNSRVQTQLAAA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtactactcaaccgaagtcaaagaagccgccaaacgtctgtttctgcgccgtcacaag
gccaaggaaattcaggcgcaactcaacctgcccaacatccggatcgtgtaccactggatc
cgcgtcggtggctgggaagacatgctgacggatgaagagccgctgaccgctgtcagccgg
cgaatcaccttgctcctggagaaagcagactcgctgaccaagggcgatctggacgaactg
gaccggttgacgactgtgcgcgaacgcctggccaagcaatgcgcaaagccagccgcaatg
ccggtacgtgatgaacagagcaacgatggccatcgccgtgacgatgaacgcggtgagcgt
cgggagcgtggcaagcgcgacggcaagaagcgggaaaagaaggtcaagaacgacgtcagc
gagctgcgtgaagtggactttctcgacaagttcatcagcaaaatgtacggctaccagaaa
gagctgtttgcggccaaacagaacccgctgaacgccagaatccggaacatcctcaaaagt
cgccaggtgggcctgacctactacttcgccggcgaagcgttcatggacgcggtgctgacc
ggcgacaaccaggtgttcctgtcggccagtcgcgcccagtccgagattttccgcagctac
atcatcgcattcgcccaagcctggttcggcctggagctgaccggcaacccgatcgtactc
agcaaggacggcaagccctgggctgaactgcgcttcctcagcaccaacagcagcaccgcg
cagggtcaccatggccatgtgtacgtcgacgaatatttctggatccgcgactttgagaag
ctgaacactgtcgccagcgccatggccacccataagaagtggcgcaaaacctacttctcc
acgcccagcgccgtttcgcaccaggcctacccgttctggcagggcgagaaattccgcaac
agcaaacgcaaggctgccaaggatccatggccaagcgacaaacagatctctgccggcgcg
ctgtgtccggacggtcagtggcgcaaagtcatcaccatcctggacgcaatcgccggcggc
tgcgatctgttcgacctcgagcagctgcagctggagtacgacgacgacaagttccagcag
ctgttcatgtgcaagttcatcgacagcagccagagcgcattttccctggcagatctggag
cggtgctattcggatctgtcgttgtgggcagacttcgatccggatgacccacggccgtat
ggcaacagcccggtctggatcggttatgacccgagccggacacgcgacgacgcgacgtgc
gtagtcatcgcaccaccactggagaacggcggcaagttccggatcttggaaaagcacagc
tggcgtggtcagtcattcaagtaccaggccgagcaggtcaagaagctgacagagcgtttc
aacgtccagcacatcggtatcgatacgaccggcatcggctacggcgtattcgacatggtg
cgcgacttctacccgcgtgccacctcgatccattacagcctggaaaccaagaacctgttg
gtgctcaaggcgcaggacaccatccagggcagccgcatcgagtgggacgccggctggaac
gatatcgcccaggcgttcctgacgatcaaacgtggcaccaccggcagcggccaggtcact
tacagcgcctcacgcacggacgccaccggtcacgcagacgtggcctgggcaatcatgcac
gccctgcagtacgaacccctcaacaccgacaaaaagcggcgcagtagctacgcactcact
ggatcaacttctcatggcaaaacccaaaaccctgcagcaggaaaaaccggcccagcggcc
catgcgcgcgttcacgttcggtgcgccggaatcggtattgaccgacaacatcgcgcagta
cctgggcgtgttcgccagcgacgacggacgtgtctatacgccgccagtgtcgcgcaaggg
gttggcaaggctgctcaaagccaatgcgcaccacggcgcaattccagggttcaaacgcaa
cttgctgctgcgtga
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