Pseudomonas cannabina pv. alisalensis: JGS08_25745
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Entry
JGS08_25745 CDS
T07379
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JGS08_25745
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Gene cluster
GFIT
Motif
Pfam:
rve
HTH_Tnp_1
rve_2
HTH_21
rve_3
HTH_23
HTH_29
HTH_28
HTH_Tnp_ISL3
CENP-B_N
DUF134
HTH_Tnp_IS630
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QQN21909
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Position
complement(join(5759533..5760437,5760437..5760710))
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AA seq
392 aa
AA seq
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MTKLKTDRVKYTLEFKLEAVRLVDTGLTLAAAARSLGMSDQTLFNWVKAHRQGRLTGADI
KPVTPEQMEISRLRAELVRVKMERDILEKATGVLRKSIQLKYAFIFDHRRLWPIGVQCRV
LGVSATGFHGHQVRCAANCPRRGVSDTALLVHIRVAHARSRGSYGWPRIWQGLLADGIRV
GKHRVQKLMQLHGIYGKGKRRFRGTTDSAHDLPISPNLLDRQFTVTEPDKAWVGDITYIP
TDEGWLFLAVVIDLFSRQIVGWSMDERMKSSLVIDALRMAWFKRHPPKDSGLLFHSDRGS
QYASFDFRNTLLAYGIASSMSRRGNCWDNACSETVFGSLKVERLHGLKFKTRRAAKDEVM
NWLLWYNQDRLHSTLHYVSPMQYERNWRMQQP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgactaagctcaagacagaccgcgtcaaatacaccctcgagttcaagcttgaggccgtg
cgactggttgataccggcctgacgcttgctgccgctgcccgctctctgggtatgtccgat
cagaccctgttcaactgggtcaaggcgcatcgtcaaggcaggctcactggagctgacatc
aagcccgttacccccgagcagatggagataagccgtctgcgagctgagctggtgcgggtc
aagatggagcgcgacattctggaaaaggcgacgggcgtacttcgcaaaagcatccagctg
aagtacgcgttcatcttcgatcatcgacgtctctggcctattggcgtgcaatgccgggtg
ttgggcgtcagtgctaccggctttcacggccaccaagtacgctgtgcagccaattgtcct
cgacgaggagtcagcgacacggcattgctcgtgcacatccgcgttgctcatgcccgcagc
cgtggcagctacggctggcctcgaatctggcaaggcttgctggccgacggtattcgtgtc
ggcaagcatcgtgtgcagaaactgatgcagctccacggtatttacggcaagggcaaacga
cgtttcaggggcactacggatagtgcccatgacttgcctatttcacccaacctgttggat
cgtcagtttaccgtgacggagcctgacaaggcttgggtgggcgatatcacctacatcccg
accgatgaaggctggctatttttggctgtcgttatcgacctgttcagtcgtcagattgtg
ggttggtcgatggatgaacggatgaaaagcagtttggtgatcgatgcgttgcgcatggct
tggttcaagcgccacccaccaaaagactcagggttactgtttcatagcgatcgaggaagt
cagtacgccagtttcgacttccgaaatactctcttggcctacgggatcgccagctccatg
agtcgacgtggtaactgctgggataacgcgtgcagcgagaccgtgtttggttcgctgaag
gtggagcgcctgcatggtctgaaattcaaaacccggcgcgccgccaaggacgaggtcatg
aactggctgctgtggtacaaccaagatcgcttgcactcgacgcttcattacgtaagtccg
atgcaatacgagcggaactggcgaatgcaacaaccttag
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