Pseudomonas cannabina pv. alisalensis: JGS08_25785
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Entry
JGS08_25785 CDS
T07379
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00521
Streptomycin biosynthesis
pcab00523
Polyketide sugar unit biosynthesis
pcab00525
Acarbose and validamycin biosynthesis
pcab00541
Biosynthesis of various nucleotide sugars
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01250
Biosynthesis of nucleotide sugars
Module
pcab_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JGS08_25785 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JGS08_25785 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JGS08_25785 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JGS08_25785 (rfbB)
00525 Acarbose and validamycin biosynthesis
JGS08_25785 (rfbB)
Enzymes [BR:
pcab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JGS08_25785 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QQN21916
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Position
5769504..5770586
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AA seq
360 aa
AA seq
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MRILVTGGAGFIGSALIRHLIYNTEHDVLNFDKLTYAGNLESLQSIATNTRYEFVQADIC
DQAKVSAVLERFAPHAIMHLAAESHVDRSIDGPAEFVQTNIVGTYSLLEATRAYWLKLPE
AERQAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP
VVVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLYVEDHARALLKVVT
EGEVGETYNIGGHNEQKNIDVVRGICTLLDELTPQHPAGVQHYSDLITYVVDRPGHDQRY
AIDASKIDKYLGWTPEETFESGLRKTVQWYLDNLDWCRRVQDGSYQGERLGFSENKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatactcgtcactgggggcgcgggcttcatcggctccgcactgatccgccatctg
atatacaacaccgaacacgacgtgctgaacttcgacaaattgacgtacgccggcaacctt
gagtcgctgcagtcgattgcgaccaacacacgctatgagttcgtgcaggccgatatctgc
gatcaagccaaggtcagcgcagtgctggagcggttcgcaccgcacgcgatcatgcacctg
gcggctgaatcccacgtcgaccgttccatcgatggcccggcagagtttgtgcaaaccaac
atcgtcggcacttacagcctgctggaggccacgcgcgcctactggctgaagctgccggag
gccgaacgtcaggccttccgtttccaccatatttccaccgatgaagtgtatggcgacctg
cacggtgtcgacgatctattcaccgaaaccacgccctatgcgcccagctcgccgtactcg
gcaagcaaggctgcgtccgatcacctggttcgcgcctggcatcgcacttatggcctgccg
gtggtggtgaccaactgttccaataactatggcccgttccatttccccgaaaaactgatc
ccgctggtgattctcaacgccctcgcgggcaagccgctaccggtgtatggcaatggcctg
caagtgcgcgactggttgtacgtcgaagaccacgcgcgggcactgctcaaagtggtcacc
gagggcgaggtcggtgagacgtacaatatcggtggtcataacgagcagaagaacatcgac
gtggtacgcggtatctgcacgctgctcgatgaactgaccccgcagcatccggcgggcgtt
cagcactacagcgacctgatcacctacgtggtggatcggccgggccacgaccagcgttac
gccatcgacgccagcaagatcgacaaatacctcggctggacacctgaagaaaccttcgag
tccgggctgcgcaagacggtgcagtggtatctggacaatctggactggtgccgcagggtt
caggacggcagctatcagggcgagcgactgggcttcagcgaaaacaaagatctgattgcc
tga
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