Pseudomonas cannabina pv. alisalensis: JGS08_25935
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Entry
JGS08_25935 CDS
T07379
Symbol
tssA
Name
(GenBank) type VI secretion system protein TssA
KO
K11902
type VI secretion system protein ImpA
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JGS08_25935 (tssA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcab02044
]
JGS08_25935 (tssA)
Secretion system [BR:
pcab02044
]
Type VI secretion system
Imp/Vas secretion system core components
JGS08_25935 (tssA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
QQN24839
LinkDB
All DBs
Position
5806815..5807822
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AA seq
335 aa
AA seq
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MDVPLLLAAVSANFPCGDDLEYDPDFLQLERDAQGRPERVMGDSIQPAEPPQWRAIEQSS
VALLQRSKDLRITHFLLQSALALDGVAGLGNVLTLISELLKQYWADIYPQLDADDDNDPT
VRINALSGLTCDTNIRLLRESVLIRSRAFGTVSLRAALSASGLQSFADETLTADTLSAAL
RDSDPEQLDATRGALSEARSAAEFIERFVSEQVGSAQGVDLSPLKQLLRQTMQILGEQSV
ASADNEPVDEAPGSAAQAPASIMPSASGDIATRDDVLRSLDRILSYYTRHEPSSPLPVLL
NRAKNLVHADFEAIVRNLIPDGMSQFENLRGPEAD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtaccgttgctgctcgctgcagtttccgccaactttccttgcggcgatgatctg
gaatacgacccggattttctgcaattggagcgcgatgcccaaggccgtcctgaacgcgtc
atgggtgactcgatacaacctgccgagccaccccaatggcgcgccatcgagcaatcgagc
gttgcgctgctgcagcgcagcaaagacctgcgcatcacccatttccttctgcaaagtgcc
ctggcgctcgacggcgttgccggcctgggcaacgtgctcacgctcatcagcgagcttctc
aagcaatactgggccgatatctacccgcagcttgatgcagatgacgacaacgaccctacc
gtgcgcattaatgcgctgtcaggtctgacctgcgacaccaatatccgcctgctgcgcgaa
agcgttctgattcgttcccgggctttcggcactgtcagcctgcgcgccgcgctcagtgcc
agcggcctgcagagctttgccgatgagacgctgaccgccgataccttgtctgccgctctg
cgcgacagtgatcccgagcaactggacgccacccgaggcgcgctgagcgaagcacgctcg
gccgctgaatttatcgagcgcttcgtgtccgagcaggtcggttcggcacagggtgtcgac
ctgtccccgctgaaacagctgctcaggcaaaccatgcagattctgggcgagcagagcgtc
gccagtgctgacaacgagccggtcgacgaagcgccagggtctgccgcgcaagcgcccgcc
tccatcatgccaagcgcgtccggcgacattgccactcgcgacgatgtactgcgcagcctt
gatcgaattttgagttattacacccgccacgagccttcgagcccgctgccggtgctgttg
aaccgagcaaagaatctggtgcacgccgatttcgaagccatcgtgcgtaacctgattcca
gacggtatgtcgcagttcgaaaacttgcgcggacccgaggctgactga
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