Pseudomonas cannabina pv. alisalensis: JGS08_26360
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Entry
JGS08_26360 CDS
T07379
Symbol
hexR
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_26360 (hexR)
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
Other families
JGS08_26360 (hexR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
QQN22012
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Position
complement(5905767..5906633)
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
TGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVRENLDSHALQL
AVTAMAGANRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKSTDVAV
CISQSGRSKDLLITANLVRESGATLITLCPSQTPLAELSSVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRGLRLSPKSIKTHED
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctgctgcaacacatcgcccagtcacgtcacctgttgcgcaaatcggagctcaaa
gtagccgaccatgtgctgcttgaccctgcggccgtgatgcacagttccatggccgatctg
gcgcacagcgtcgggatcagcgagccgaccatcgtgcgcttctgtcgcgccatcggctgc
accgggtttcaggacctcaagctcaagttggcgcaaagcctggcggcgggtgccagtttc
ggccagttcgcgattcacgaagacgattcggtcgctgattacagcctgaagattttcgac
accaccctgcacacgctcatggaagtgcgcgagaaccttgattctcacgccttgcaactt
gcggtcacggcaatggccggcgccaatcgggtcgagttttacgggttcggggcgtcaggc
gcggtggctgccgatgcgcaacacaagttcttccggctgctgctgaccgcagcggcgtat
tccgacccgcacatgcaggccatgtcggccgtcacgctcaagtcgacagatgtagcggtg
tgcatttcccagtcggggcgctccaaggatttgctgatcaccgccaacctggtccgcgag
agcggcgcgacgctgatcacactatgcccgagccagacgccgctggccgagctgtcttcg
gtcaatctggcgatcgatgtgcacgaagacaccgaaatctacacgccgttgacttcgcgc
atcgcgcatctggtggtcatcgatgtgctggcgatgggcgttgcgatggcgcgcggcccg
agcctggtcaaccatcttaaaagcgtcaagcgcagcctgcgcggcttgcgtctttcgccg
aagtcgatcaagacccacgaagactga
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