Pseudomonas cannabina pv. alisalensis: JGS08_26910
Help
Entry
JGS08_26910 CDS
T07379
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcab03009
]
JGS08_26910 (rsmB)
Enzymes [BR:
pcab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
JGS08_26910 (rsmB)
Ribosome biogenesis [BR:
pcab03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JGS08_26910 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
PCMT
Methyltransf_31
MTS
Methyltransf_23
Methyltransf_15
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
QQN22105
LinkDB
All DBs
Position
complement(6040537..6041862)
Genome browser
AA seq
441 aa
AA seq
DB search
MNPRLAAAKALAAVLSGKASLNSSLPTQLDKVELRDRGLTQDLAFGTARWQPRLSALAAK
LLQKPFKAADADVEALLLVGLYQLFYSRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRN
AQRDGEALLIELEHDPVVRTAHPRWLQKALKAAWPEQWEAICAANNAHPPMILRVNRRHH
SRDQYLELLNTAGLEASACTFSQDGIVLAEPCDVRSLPGFAEGWISVQDEAAQLAADLLE
LAPGQRVLDACCAPGGKTCHLLEVQPQLSAVVAVDLEAKRLVRVRENLDRLGLDAELIAA
DARDTASWWDGTPFQRILLDAPCSATGVIRRHPDIKLTRQLDDIAALATLQGELLDALWP
TLQVGGMLVYATCSTLPTENTDVIEAFLARTSGARELDIAGQDGQPAAGIKQAHGRQLLA
QQGGHDGFYYAKLIKIAAARE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgtctggccgccgccaaggcactggctgccgtgctcagtggcaaggcgtcg
ctgaacagctcgctgcccacgcaactggacaaggtcgagctgcgtgatcgcggtctgacc
caggatctggcatttggcacagcacgctggcagccgcgtctgtcggcgctggccgccaaa
ctgttacaaaagccgttcaaggctgccgatgccgatgtcgaggcgctgctgctggtgggc
ctttatcagctattttacagccgcatccctgcgcatgcggccattggtgaaaccgttggc
tgcgccgacaagctgaaaaaaccgtgggccaaaggcttgctcaacgctgtgctgcgtaat
gcacaacgtgatggcgaagcgctgctgatagagctggaacacgacccggtggtgcgcacc
gcccacccgcgctggctgcaaaaagccctgaaagcggcatggccggaacaatgggaagcc
atctgcgcagccaacaacgcgcacccgccgatgattttgcgagtcaatcgccgtcaccac
agccgcgatcagtaccttgagctgctgaatactgccgggcttgaagccagtgcctgcacg
ttcagtcaggacggcatcgtgctggccgaaccgtgtgacgtgcgctcgctgcccggcttt
gccgaaggctggatcagcgttcaggacgaagccgcgcaactggccgccgacctgctggaa
ctggcccccggccaacgtgtgctcgacgcctgctgcgcgccgggtggcaagacctgccat
ctgctggaagtgcagccgcaactgagcgccgtggtggccgtggacctggaagccaagcgc
ctggtgcgcgtgcgtgaaaacctcgaccggctgggcctcgacgccgaactgatcgccgcc
gacgcccgcgacacggcaagctggtgggatggcacaccattccagcgcatcctgctcgac
gcgccgtgctcggccaccggcgtgattcgtcgtcacccggacatcaagctgacccgccag
ctggacgacatcgccgcactcgcgaccttgcagggcgaactgctcgacgcgctgtggcct
acgctgcaagtgggcggcatgctggtatatgcgacctgctcgacgctgccgaccgaaaac
accgacgtcatcgaagcgtttctggcccggacgtcgggcgccagagagctggatatcgcc
gggcaggacgggcagccagcggccggcatcaagcaggcgcatggccgccagttgctggcc
caacagggtggtcacgatggtttttactacgccaaactgatcaagatcgcagcggcgcgg
gagtaa
DBGET
integrated database retrieval system
