Pseudomonas cannabina pv. alisalensis: JGS08_27225
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Entry
JGS08_27225 CDS
T07379
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcab03032
]
JGS08_27225
03036 Chromosome and associated proteins [BR:
pcab03036
]
JGS08_27225
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_27225
DNA replication proteins [BR:
pcab03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JGS08_27225
Chromosome and associated proteins [BR:
pcab03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JGS08_27225
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JGS08_27225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
SSPI
Motif
Other DBs
NCBI-ProteinID:
QQN24880
LinkDB
All DBs
Position
unnamed:1451..1744
Genome browser
AA seq
97 aa
AA seq
DB search
MALTKDQLVAGIAEAIDAPKTTARNALEQLGQIVADQLESGAEITLPGIGKLKVAERPAR
TGRNPSTGASIDIAAKKVVKFVSAKVLNDAINKGGVS
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggctctgacgaaagaccaattggttgccggtattgcagaagctatcgatgcgccaaaa
accaccgcgcgtaatgctcttgagcaattgggacagatcgttgccgaccaactggaaagc
ggtgcagaaatcactctaccgggcatcggcaaactgaaagtggcagagcgtccagcacgc
actggccgcaacccttcgactggtgcctctatcgacattgctgccaagaaagtcgtcaag
ttcgtctcggctaaagtgctgaacgacgcgatcaacaagggcggcgtttcatag
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