Pectobacterium cacticida: OI450_00045
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Entry
OI450_00045 CDS
T08693
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pcac
Pectobacterium cacticida
Pathway
pcac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OI450_00045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcac02000
]
OI450_00045
Transporters [BR:
pcac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
OI450_00045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UYX06886
LinkDB
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Position
11974..13524
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AA seq
516 aa
AA seq
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MKKSTLALLFTVLFSSSPLAYSADLNIGLASSTTSMDPQFYVGGANSAMARNIFDGLVVQ
DEKQQIVPALATRWKVIDDKTWEFVLRPGVKFHDGSDFTAKDVIASIKRVALASKNSPSS
YAPYVSDITDVIEVNPLTVRIKTKEASPLLLNNLSRISILPARLENVPTETLNSGKDVIG
TGPFKFVSWVPDDKVVLARNDNYWGGKAEWDNVTVRVFKNSSARVAAILSGDVDMIENVP
TADSRNIEKNQQLRTISTPGNRVIYLHMDQQRDESPFAKGPDGKNPLLKKEVRQAMSLAI
NRQAIVDRVMEGKAVVASQLVPKGYPGYSASIPAPVYNPEKAKQELAAAGYPNGFTLTFH
ASNDRYPNDAKIAQAIGQMFTRVGIKTEVVTMPGSVYFSRASRQDFSLIMGGAAIETGEA
SGVLGPLLETFGPNAGQGNRGRYSNPVFDKTLSEARSTLDETKRDALLAEAMNIGMNDVG
VIPMMFLSNTWAMKKQYTYVGRADAYTLPYFVRSAK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcaacgctggcgttattatttaccgttttattttcatcttcacctttggct
tacagtgccgacctgaatattggtttggcctcctccacaacctcaatggatccgcaattt
tatgtggggggagcgaatagcgcgatggcgcgtaatatttttgacggcttggttgtacag
gatgagaaacagcagattgtccctgccctggcaacccgttggaaagtgattgacgacaag
acgtgggagtttgtattgcgtcctggcgttaagtttcacgacggcagtgattttacggcg
aaagatgtgattgccagcattaagcgtgttgcgctggcatcgaaaaacagccctagctct
tatgcaccttacgtcagcgacattactgacgtaatagaagtcaatccactcacggtgcgg
ataaagacaaaagaggcatcgccgctgctgttgaataatttaagccggatttccatttta
ccagctcgattagagaacgtcccgacggaaacgttgaattcggggaaagacgtgattggc
accgggccattcaaatttgtttcctgggtgccggacgacaaggtagtccttgctcgtaat
gataattactggggagggaaagcagagtgggacaatgtaactgtccgtgtatttaaaaac
agtagcgcacgcgtcgcggctatattatccggtgatgtggacatgattgaaaacgtaccc
accgccgatagccgtaatattgaaaagaatcagcagttaagaacgatttcaacaccaggg
aatcgtgttatttaccttcacatggatcagcagcgagacgagtcgccgtttgctaaaggt
cctgatggtaaaaacccattactaaaaaaagaagttcgccaggcgatgtctttagcaatt
aatcgtcaggcaatcgttgaccgagtgatggaggggaaggcggttgttgcctctcagctt
gtcccgaaggggtatcccggttattccgcttccattcctgcgccggtttataatccggag
aaggccaaacaggaactggcagcggcgggttaccccaacggcttcacgctgaccttccac
gcgtcgaacgatcgttatcctaatgatgctaaaattgctcaggccattggccaaatgttc
acacgcgtcggcattaaaactgaagtggttacgatgcccggcagtgtgtatttttcacgc
gcctcccgtcaggattttagtttgattatgggcggtgcggcgattgaaaccggggaagct
tctggcgtattggggccgttgttagaaacgtttggccctaatgcagggcagggtaatcgt
ggtcgctattctaaccctgttttcgacaaaacgctgagcgaagcacgatcgacgctggat
gaaaccaagcgtgacgcgttgctggctgaggcgatgaacatcggtatgaacgatgtaggc
gttattccgatgatgttcctgtccaacacctgggcgatgaaaaagcagtatacctatgtg
gggcgtgccgatgcctacacgctgccgtatttcgtccgttccgccaaatag
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