Pectobacterium cacticida: OI450_00505
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Entry
OI450_00505 CDS
T08693
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcac03021
]
OI450_00505 (rpoH)
Transcription machinery [BR:
pcac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OI450_00505 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
UYX06968
LinkDB
All DBs
Position
112923..113780
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AA seq
285 aa
AA seq
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MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLDAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPDVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKAKTRLGWFNQDEVDLVARELGVTSKDVREMESRMAAQDM
TFDPTPEEESHDGKAMSPMLYLQDKSSDFADGIEEDNWETHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccaaggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctcacggcggaggaagagcgggcgctggctgaacgg
ctgcattatcagggcgatctggatgccgctaagcacctgattctgtcgcacctgcgtttt
gttattcacgttgcccgtaactattccggctatggtctgccgcaggcggatttgattcag
gaagggaatatcggcctgatgaaagcggtacgtcgcttcaatcctgatgttggtgtgcgt
ctggtttctttcgccgtacactggatcaaggcagaaattcatgaatacgtgttgcgtaac
tggcgtattgtgaaggtagcgaccactaaagcacagcgtaagctgttctttaacctgcgt
aaggcgaaaacgcgtctcggctggtttaatcaggatgaggtcgatctggtcgcgcgtgaa
cttggcgtaaccagcaaagatgtgcgtgagatggaatcccgcatggcggcgcaggacatg
acgtttgatccgacaccggaagaagagtcgcatgatggcaaagcgatgtcgccaatgctt
tacctacaggataaatcgtctgattttgccgatggcattgaagaagataactgggaaacg
catgcggccgataagcttacctacgcgctggaaggattggatgagcgcagccagcacatt
attcgcgctcgctggctggatgatgacaacaaatccaccttgcaggagttggccgatcaa
tacggggtttctgcggagcgtgtgcgccagttggaaaagaatgcgatgaagaaactgcgt
gcggcgatagaagcctga
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integrated database retrieval system
