Pectobacterium cacticida: OI450_00945
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Entry
OI450_00945 CDS
T08693
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pcac03110
]
OI450_00945 (clpB)
Chaperones and folding catalysts [BR:
pcac03110
]
Heat shock proteins
HSP100
OI450_00945 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
TniB
nSTAND3
AAA_14
bpMoxR
ATPase_2
AAA_7
AAA_24
NBD_SMAX1
IstB_IS21
NACHT
DUF815
HEPN_Toprim_N
T2SSE
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UYX07042
LinkDB
All DBs
Position
220826..223402
Genome browser
AA seq
858 aa
AA seq
DB search
MRLDRLTNKFQLALADAQSLALGRDHQFIEPLHLMSALLHQDGGTVGPLLTVAGANLNHL
KTEIDQALTRLPQVEGTDGDVQPSSELVRVLNMCDKLAQKRGDTFISSELFVLAALESRG
TLGDILKKAGVTQESVTKAIDQVRGGDQVNDQGAEDQRQALKKFTIDLTERAEQGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL
DMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK
PALARGELHCVGATTLDEYRQYLEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELH
HHVQITDPAIVAAAMLSHRYIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRII
QLKLEQQALKKESDEASLKRLELLSAELEQKEREYSQQEEEWKAEKASLTGTQNIKASLE
QAKIALEQARRQGDLARMSELQYGRIPELEKQLAAATQQEGKTMHLLRNRVTDVEIADVL
ARWTGIPVSRMLESEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKTLATFLFDSDNAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQERFGERSYAEMKDMVLEVVSHSFRPEFLNRIDEVVVFHPLGRAHITSIAQIQLQ
RLYKRLEERGYSVTITDAALNRLGEVGFDPVYGARPLKRAIQQLIENPIAQQILGGKLIP
GKPITLDLEGERIVARQE
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggatcgtcttaccaacaaattccaacttgctttagctgatgctcagtctctt
gccctcggacgcgaccaccagtttattgaaccccttcacttgatgagtgctttattgcat
caagatggcgggacagtcggcccgcttttgaccgttgccggcgccaaccttaatcatctt
aaaactgaaatagatcaagcgctcactcgtttgccacaggttgagggcactgatggcgat
gtccaaccgtcaagtgaacttgtgcgtgtattaaatatgtgcgacaagctggcacagaaa
cgtggcgatacttttatctcttcggaactttttgtgctcgccgccctagagtctcgtgga
acgttaggcgatatattgaaaaaggcgggggttacgcaggaaagcgtaacaaaagccatc
gatcaagtcagaggtggggatcaagtgaacgatcaaggggccgaagaccagcgtcaggcg
ctgaagaaattcaccatcgacctcacggaacgcgcggagcaaggcaaactcgatcccgtg
attggacgggatgaagagattcgtcgtacgattcaggtcctacagcgtcggactaagaat
aatccggtattaattggtgaacccggtgtcggtaaaactgcgattgtcgaggggttggcg
cagcgtatcgttaatggtgaagtgcccgaaggcttgaaaaacaagcgcgtgctttcactc
gacatgggggcgttggtcgccggggcgaaatatcgtggcgagtttgaagagcgcttaaaa
ggcgtgcttaacgatttgtctaagcaggaaggaaacgtcatcctgtttatcgatgagctc
cataccatggtgggtgcaggtaaagccgatggcgcgatggatgccgggaatatgctgaaa
ccggctctggctcgtggtgagttacattgcgtgggggcgacaacactggatgagtatcgc
cagtatcttgaaaaagatgccgcgttggaacgtcgtttccagaaggtatttgtggcggag
ccgactgttgaggatacgatcgcaattctgcgtgggctgaaagagcgctatgaattgcat
catcatgttcaaatcactgacccggcgattgtcgcagcagccatgctatcgcatcgttat
attgccgatcgccagttgcccgataaggcgatcgacctgattgatgaagcagcttccagc
atccgtattcagattgattcgaaaccagagcctcttgatcggttggagcgtcgtattatc
cagcttaagctagaacagcaggcattaaagaaagaatctgatgaagctagcctgaagcgg
cttgaattgctgagtgctgagcttgagcaaaaagagcgcgagtattcccaacaagaggaa
gaatggaaagcggagaaagcgtcactcaccggaacacagaatattaaagcgtcccttgag
caggcgaaaatagcactggagcaggctcgtcgacagggcgatctggcgagaatgtctgag
ctgcaatacggtagaattcctgaacttgaaaagcaactggcagcggcgactcagcaggaa
gggaaaacgatgcatttgttgcgtaatcgagtgacggatgttgagattgctgatgtgttg
gcgcgttggaccggtattcctgtttctcgcatgttagaaagcgaaaaagagaaattattg
cggatggaagacgagctgcatcaacgcgtaattgggcagaatgaagccgtagaagcggta
gcaaactctattcgccgcagccgggcagggttgtccgatcctaaccgtccgattgggtct
tttctgtttcttggccctaccggcgttggtaaaacagaactctgtaaaacgctggcgacc
ttcctcttcgacagtgataacgcgatggttcgtattgatatgtctgagtttatggagaaa
cattccgtatcgcgtttagtcggggctcctcctggctatgtcggttatgaggaaggggga
tatctgacggaagccgtacgtcgccgtccttattccgtcattctattggatgagatagaa
aaagcgcaccctgatgtcttcaacatcctgctacaggtattggatgatgggcgtcttact
gacggtcagggccggacggttgattttcgtaatacagtcgtcattatgacgtcaaacttg
gggtctgaccttattcaggagcgctttggtgagcgcagctatgccgaaatgaaagacatg
gtacttgaagtggttagccacagcttccgccctgaatttcttaatagaattgatgaagtt
gtcgtattccatcccttggggagggcacatattacgtcgattgcgcaaattcagcttcag
agactttataagcgccttgaagagcgcggatatagtgtcacgattacggatgcggcctta
aatagacttggggaagtcgggtttgatcctgtctatggtgcgcgaccgcttaaaagagcg
atacagcagttaatagagaatccgattgctcagcagatactaggcgggaaattgataccc
ggcaaacctattacattggatctggaaggggagcggatagtcgcacgccaagagtaa
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