Pectobacterium cacticida: OI450_02110
Help
Entry
OI450_02110 CDS
T08693
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac00300
Lysine biosynthesis
pcac00470
D-Amino acid metabolism
pcac01100
Metabolic pathways
pcac01110
Biosynthesis of secondary metabolites
pcac01120
Microbial metabolism in diverse environments
pcac01230
Biosynthesis of amino acids
Module
pcac_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OI450_02110 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OI450_02110 (dapF)
Enzymes [BR:
pcac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OI450_02110 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UYX07243
LinkDB
All DBs
Position
442085..442909
Genome browser
AA seq
274 aa
AA seq
DB search
MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHCGVGFDQLLIVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIAVSTQTGRMVLTVTDNELVRVNMGE
PNFEPQQVPFRAVKAEKTYIMRAGEHTVLCGVVSMGNPHCVIQVEDVDTAKVETLGPLLE
NHERFPERANIGFMQVVDSQTIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAANVRV
SLPGGELDIQWGGPGHPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgctaagatgcacgggttaggcaacgatttcatggttgttgatgccgttacg
caaaacgtttatttttcacccgaactgattcgtcgtttggcggatcggcattgtggtgtg
ggattcgatcaacttttaattgtcgaaccaccctacgatcctgaactagatttccattac
cgtattttcaacgcagatggcagtgaggttgcgcagtgtggtaatggcgcacgttgtttt
gcccgttttgtccgtttgaaagggttaactaataagcgtgatattgcggttagtacgcag
accggacggatggtgctgacggtgactgataatgaattggtgcgcgttaatatgggggaa
cccaatttcgagccacagcaggtgccgtttcgtgcggtgaaagcggagaagacctacatt
atgcgcgctggcgaacacacggtgctgtgcggcgtggtatcaatgggtaatccgcactgt
gtgattcaggttgaggatgtggacaccgcgaaagtagaaaccctggggccgttattagaa
aatcatgaacgttttcccgaacgtgccaacattggtttcatgcaggttgtcgatagtcaa
actatccgtttgcgtgtatacgagcgcggtgccggggaaacgcaggcctgcgggagtggc
gcgtgtgcggcggtagccgtagggattcaacagggattattagccgccaatgtgcgcgta
tcccttcctggcggtgagttggatatccagtggggggggccagggcatccgctatttatg
actggccctgcaacgcatgtttacgatggatttattcatttatga
DBGET
integrated database retrieval system