Pectobacterium cacticida: OI450_02130
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Entry
OI450_02130 CDS
T08693
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac03420
Nucleotide excision repair
pcac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OI450_02130 (uvrD)
03430 Mismatch repair
OI450_02130 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcac03400
]
OI450_02130 (uvrD)
Enzymes [BR:
pcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OI450_02130 (uvrD)
DNA repair and recombination proteins [BR:
pcac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OI450_02130 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
OI450_02130 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
UYX07247
LinkDB
All DBs
Position
445342..447504
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQREAVAAPRRNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDSLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFSGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGVEGEPISLYCAFNELDEARYVVNRIKAWQENGGALSDSAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTMWQSARLLLQEKVLAGRAAAALQRFIELIDALAYETSELPLHVQ
TDRVIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDLDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTITYAESRRLYGKEAFHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITQSDSGYTLGQRVRHAKFGEGTIVNLEGSGDHARLQVAFQGQGIKWLVAAYARLEMV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttctgatctgcttgatggccttaacgacaaacagcgcgaagcggtggccgca
ccgcgccgcaatttattggtgttggcgggggctggcagcggcaaaacgcgggtactggtg
caccgcattgcctggctactatccgtagaaaattgctcgccttattccatcatggcggtg
acatttaccaacaaagcagccgcagagatgcgtcatcgcatcgacagcctgattggcacc
agtcagggcgggatgtggattggcacttttcatggattggcacaccgtttactgcgtgcg
catcatatggacgccaatctgccgcaggattttcagatccttgacagtgaagatcagcta
cggctgctgaaacggttgattcgggcgctcaatctggatgaaaagcagtggccgccgcgc
caggccatgtggtttatcaacggtaagaaggatgaaggcctgcgcccacagcatatcgaa
agttacggtaatccgatcgaacagacgtggcagcgtgtgtatcaggcctatcaggaagcg
tgcgatcgagccgggttagtggatttcgccgagctgctgttgcgggcgcacgaattgtgg
ctgaacaagccacatgtactgaaccactatcgtgagcgctttaccaatattctggtggat
gaatttcaggatactaaccgcattcagtatgcctggatccgcatgctggcgggcgatagc
gcgaaggtgatgatcgtcggggatgacgaccagtcgatttacggctggcgcggggcgcag
gtcgaaaatattcagttgttcctaaaggatttctctggcgccgaaaccatccggctggaa
caaaattaccgttcgaccagcaatatcctgaaagcggcgaatgcgctgattgcccataac
ggcgggcggcttggcaaaaatctgtggacggacggtgtcgaaggggaaccgatttcactt
tattgcgccttcaatgaactcgacgaagcgcgctatgtcgtcaaccgaattaaagcctgg
caggagaatggtggagcattgagcgatagcgccatcctctaccgaagtaacgcccagtcg
cgcgtgctggaagaggcgctgttacaacagagtatgccgtatcgcatctatggtggcatg
cgcttcttcgagcgtcaggaaatcaaagacgcgctgtcttatctacgcctgatcgccaat
cgtaatgatgatgcggcgtttgagcgcgtggtgaatacgcccacgcgcggtatcggcgat
cgcacattggatgttgtacgccagacctcgcgcgatcgccaactgacgatgtggcaatcc
gcacggttgctgttgcaggagaaagtgctggctgggcgcgcggcggcggcgctgcaacgc
tttatcgaattgatcgacgcgctggcttatgaaacgtcggaattgccgctgcatgtgcag
accgatcgggtcattaaagattccggtttgtggagcatgtacgagcaggaaaagggcgag
aaagggcaggcgcgagtagaaaacctggaagaactggtgacggccacgcgtcaattcagt
tatcaggaagaagatctggatctgatgccgctacaggctttcctgtcgcatgccgcgctg
gaagcgggggaaggtcaggcggatgccaatcaggatgcggtacagttgatgacgttgcat
tcggcgaaagggcttgagttcccacaggtctttatcgtcggcatggaagaaggtatgttc
cctagccagatgtcgctggatgaaggcgggcgcttggaagaagagcgtcgcttagcttac
gtcggcgtgacgcgcgcgatgcaaaagttaaccataacctatgccgaatcccgccgttta
tacggaaaagaggcttttcaccggccttcccgcttcgtcggtgaattgcctgaagaatgt
gttgaggaagttcggttacgcgccagcgtctcccgaccggtcaatcaccagcgtcttggc
acgccgataacgcaaagcgatagcggctatacgctggggcaacgcgttcgccatgcgaaa
tttggcgaaggcaccatcgtgaatctggaaggcagtggcgatcacgcccgccttcaagtc
gcgtttcaaggacaaggcattaaatggctggtcgctgcctatgccagattagagatggtg
tga
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