Pectobacterium cacticida: OI450_02560
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Entry
OI450_02560 CDS
T08693
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac00230
Purine metabolism
pcac00240
Pyrimidine metabolism
pcac01100
Metabolic pathways
pcac01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
OI450_02560 (nrdD)
00240 Pyrimidine metabolism
OI450_02560 (nrdD)
Enzymes [BR:
pcac01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
OI450_02560 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
UvrA_inter
Zn_Tnp_IS91
UPF0004
PSV_ORF131-like_dom
Anti-TRAP
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UYX07324
LinkDB
All DBs
Position
complement(547085..549223)
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AA seq
712 aa
AA seq
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MKPVVIKRDGCQVPFDEVRIKEAVERAAHAAGVNDADYCATVACAVAQQMQDKSRVDIRE
IQDAVENLLMSGKYKQLARTYIEYRHDRDIARERHGRLNQEIRGLVEQSNMALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQYILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL
NGMLTNGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVTASH
EKHKAVAKEWHIPDAENYARTRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESRLIQESILRNRIAGLGKNHKTAVFPKLVFAIRDGLNRKVGDPNYDIKQLALECASKR
MYPDILNYDQVVSVTGSFKTPMGCRSFLGVYEEDGQQIHDGRNNLGVISLNLPRIALEAK
GSEARFWAILDQRLALAKKALMTRIARLENVKARVAPILYMEGACGVRLNADDNVADIFK
NGRASISLGYIGLHETINALFGNQTHVFDDEALRAKAVSIIARLKAATEQWKDETGYGFS
LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYQKIDFEQPYPPL
ANGGFICYGEYPNLQHNLKALEDVWDYSYSRVPYYGTNTPIDECYECGYTGEFECTSKGF
TCPKCGNHDSARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLSNGQLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagtagtgattaaacgggacggttgccaggtgccttttgatgaagtacgcatc
aaagaggcggtcgaacgcgcagcacacgcagccggtgtgaatgatgcggattactgtgca
acggtagcctgtgcggtcgctcaacaaatgcaggataagtcgcgcgtggatatccgtgaa
attcaggacgcggtcgaaaacctgctcatgtccggcaagtacaagcaattggcgcggact
tacatcgaataccgtcatgaccgggatatcgcccgggaacgccacggtcggctgaatcag
gaaattcgcggtttggtcgagcaaagcaatatggcgctgctgaatgaaaacgccaacaaa
gacagtaaagtcatcccgacccagcgcgacctgttggccggtattgtcgccaaacattat
gccaaacaatacatcctgccgcgtgatgtggtgctggcgcatgagcgcggtgagatccac
tatcacgatctcgactattcgccctttttcccgatgtttaactgcatgctcatcgacctg
aatggcatgctgaccaacggtttcaaaatgggcaatgccgagattgagccgccaaagtca
atctccaccgccaccgccgtcaccgcccagatcatcgcgcaggtagccagccatatttat
ggcggcaccaccataaaccgtattgatgaaattctggcgccgtttgtcaccgccagccat
gagaaacacaaggctgtggccaaagagtggcacattcccgatgcggaaaattatgcgcgc
acccgcacggaaaaagagtgttacgacgcttttcagtcactggaatatgaagtcaacacg
ctgcacaccgcgaacggccagacgccgtttgtcactttcggcttcggacttggcaccagc
tgggaatcccgcctgatccaggagtcgattctgcgtaatcgcatcgccgggctgggtaaa
aaccataaaacggcggtctttccgaaactggtgtttgcgattcgtgatggcctgaaccgc
aaagtgggcgatcccaattacgatatcaaacagctggcgctggagtgtgccagcaaacgc
atgtatcccgatattctgaattacgatcaggtggtgagcgtcacggggtcattcaagacg
cccatgggctgccgcagcttcctcggcgtttatgaagaagacggccaacagattcacgat
ggccgcaacaacttaggtgtgatcagcctgaatttgccacgtatcgcgctggaagctaaa
gggagtgaggcgcgtttctgggcgatactcgaccagcgtctggctctggccaaaaaagca
ttaatgacgcgcattgcgcgactggaaaacgtcaaagcgcgcgttgcgcctattctgtat
atggaaggcgcctgtggcgtgcgcttaaacgcggacgataacgtcgcggatattttcaaa
aatggacgcgcctcaatttctctgggttatatcggcctgcatgaaacgatcaacgccctg
tttggcaaccaaacacacgtgtttgatgatgaggcgctgcgtgctaaagccgtgtccatc
atcgcccgcctgaaagcggccaccgagcagtggaaagatgaaaccggttatggcttcagc
ctttacagcacgccgagtgaaaatctgtgcgaccgcttctgccgtctcgacaccgcggaa
tttggcgtcgtacctggcgtcacggataaagggtattacaccaacagcttccaccttgac
gtggaaaagaaggttaacccttaccagaagatcgacttcgaacagccctatccgccgctg
gctaacggcgggttcatctgctacggcgaatacccgaatttgcaacataatcttaaggcg
ctggaagacgtatgggattacagctacagccgcgtgccttattacggcaccaacaccccg
atcgatgagtgctacgagtgcggctacaccggggaattcgaatgcaccagtaaaggcttt
acctgtccgaaatgcggcaaccacgactcggcgcgcgtttccgttacgcgccgcgtgtgc
ggctatctcggcagcccggatgcccggccgttcaacgccggtaagcaggaagaagttaaa
cgccgggttaaacacctgagtaatgggcaactcggctaa
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