Pectobacterium cacticida: OI450_02735
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Entry
OI450_02735 CDS
T08693
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
OI450_02735
Enzymes [BR:
pcac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
OI450_02735
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
SdrD_B
NOMO1-like_2nd
CarbopepD_reg_2
NOMO_5th
SpaA
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
UYX07353
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Position
581058..582773
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AA seq
571 aa
AA seq
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MNKGILLLMSTVLVPYGYCAPNGNVSLSVTGMNTVLDNGLLNVKFKEDGSAESITKQGVN
IVTNLSGAIRDPSKTRSAYLDYYVKGVKDFVPERVEVIKQDKDIAHVAYIDDKGGLLRLE
YHLIMRKGVSGIYSYVVAENTGSQDVKVSELRNVYRFDPSRLDHLYNGVHIGKPLLYRQL
EQLPKVQDETWRLPDGHVYSKYDFAGYMRSTPYWGVFGHGMGAWLIHASPEYFSGDALKQ
DLMVHQDAIILNYMTGSHFGTPDMVAKPGWKKFYGPWLLYINQGDEKQVIADADRQSLTE
KVSWPYRWVNDPLYPLERTTVSGKINSTQPMTVVLSSSLDEPFDLQTRGYSYQGTTDSQG
KFSIEHVRPGKYQVSVYANGGTQPGVLAQQTVDITGVKQQLADISLPAANKIIWAIGQAD
RQAREFRFGDKVRNYHWQNDVPANLTFDIDRSDYSRDWYYAQTKPGKWDIRFALQPEKKT
YFLTLSLAGASNFGMTKATAPELDVVVNGKKVETLKYENDKTLYRGALQSGRYHLNRIPV
SYEVLKKGNNVISLQLKGGSLMYDIVTLSEE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaggtatcctgctgctaatgagtacggtattggttccttatggatattgcgcc
ccgaatggtaatgtatctctatcggttactggaatgaataccgttttagataatggtttg
cttaacgttaaatttaaggaagacggtagtgcagaaagcataaccaaacaaggagtcaat
attgtcactaacctttccggtgcgatacgcgatcccagtaaaacccgcagtgcttatctg
gattattacgttaaaggggttaaagatttcgttcctgaacgcgtcgaagtcataaaacaa
gataaagatatcgctcacgtagcctacattgatgataaaggcggactgctgcggctggaa
tatcacctgatcatgcgcaagggggtcagtggtatttatagctatgtggtcgcggagaat
acgggcagccaagatgtgaaggtgagtgaattacgtaatgtctatcgctttgacccctcg
cgacttgatcatctctataacggcgttcatattggcaaacctctgctttatcgccagctc
gaacaattaccgaaagtacaggatgaaacctggcgtttacctgacgggcatgtgtattcc
aaatatgattttgctggttatatgcgctcaacaccctactggggcgtatttggtcatggg
atgggggcatggttgattcatgctagtccggaatatttttccggcgatgcgctcaagcag
gatttaatggtgcatcaggatgccatcattctcaattatatgaccggctcgcattttggc
accccggacatggtggctaaacccggctggaaaaaattctatggcccctggttgttatat
attaatcagggagatgaaaaacaggtgattgcggatgccgatcggcaatcgctaacggaa
aaagtctcctggccctatcgttgggtgaatgatccgctctatccattagagcgcaccacg
gtgagcggcaagatcaatagcacacagccgatgacggtcgtcctgtcttcatcattagat
gaaccctttgatctgcaaacgcgcggttattcctatcagggaacgaccgatagccagggg
aaattcagtattgagcatgtcagaccgggaaaatatcaggtctcggtctatgccaatggt
gggactcagcccggcgtactggcgcaacagactgtcgatattactggcgtaaaacaacaa
ctggcagatatttccttgcccgccgccaataagattatttgggcgatagggcaggcggat
cgtcaggcgcgcgaattccgctttggcgataaagtgcgtaattatcactggcaaaatgac
gtccctgctaatctgacttttgatattgatcgcagcgattattcacgcgattggtattac
gctcagaccaaacccggtaaatgggatattcgttttgcgctacagccggaaaagaaaacc
tattttctcacactctctctggccggagcgagtaacttcggcatgaccaaggcaacagct
cccgaattggatgtcgtcgtaaatggcaaaaaggttgaaacgctcaagtatgagaatgat
aaaacgctttatcgtggcgccttacaaagtggtcgttatcatttaaaccgtattccagtg
agctatgaggtattgaaaaaagggaataacgttatttccctgcaattaaaaggcggaagc
ctgatgtatgacatcgttacgttaagtgaagaataa
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