Pectobacterium cacticida: OI450_03350
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Entry
OI450_03350 CDS
T08693
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcac03016
]
OI450_03350 (truB)
Enzymes [BR:
pcac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OI450_03350 (truB)
Transfer RNA biogenesis [BR:
pcac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OI450_03350 (truB)
Prokaryotic type
OI450_03350 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UYX07462
LinkDB
All DBs
Position
708324..709268
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATELEQALESFRGTTQ
QVPSMYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPIERMVTLEQLATLVEQAQAQELSPSLSLDSL
LMPMESPVIAFPEVNLIPVVASYLKQGQPVQAAGAPRAGMVRITEGDEHKFIGMGEIDSD
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgccgtggccgtgatgttcacggcgtattgttattagacaagccg
caaggtgcgtcatccaatgatgttttgcagaaggtaaagcggatatttaacgctaacaga
gcgggccatacgggagcgttagatccgctagcaaccggtatgttgccgatttgccttggg
gaagcgacgaaattttcccaatacctgctggattcagataaacgctaccgtgtgattgca
cgtttgggacagcgaaccgacacctctgatgccgatggcaacgtaattgaagaacgggcg
ataggtttttctgcaacggaactggagcaggcgctggagagttttcgtggcactacacag
caagtaccctctatgtattcggcgctaaaatatcaagggcgcaagctgtatgagtatgcg
cgtcaggggctgaccgtaccgcgcgaggcgcgtgaaatcaccgtttacgaactgcaattc
attcgctgggaaggtgatgagttggagctggagattcattgctcaaaaggcacgtacatc
cgcactattattgatgatttgggtgaaaagctaggctgtggcgcgcatgtgatttacctg
cgccgtttacaggttgccacgtatcctattgaaagaatggtaacgctggagcaactggcc
acattggtcgagcaggctcaggcgcaagagctctcgccttcactgagtctcgattcgctg
ctcatgccaatggagagtccggtcatagcttttcctgaagtgaatttgatacccgttgtc
gcaagctatcttaagcaagggcagcctgttcaggcggcgggtgcgccgcgtgccgggatg
gtgaggatcaccgaaggtgatgagcacaagttcatcggcatgggtgaaattgatagcgat
ggtcgcgttgcgccaagacgcctggtcgttgaatatccggcctag
DBGET
integrated database retrieval system
