Pectobacterium cacticida: OI450_03360
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Entry
OI450_03360 CDS
T08693
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OI450_03360 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcac03019
]
OI450_03360 (pnp)
03016 Transfer RNA biogenesis [BR:
pcac03016
]
OI450_03360 (pnp)
Enzymes [BR:
pcac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OI450_03360 (pnp)
Messenger RNA biogenesis [BR:
pcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OI450_03360 (pnp)
Transfer RNA biogenesis [BR:
pcac03016
]
Prokaryotic type
tRNA degradation factors
OI450_03360 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
OB_RRP5_4th
S1_2
KH_2
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
UYX07464
LinkDB
All DBs
Position
709909..712029
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQNTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKNAKPGQNFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYLNDQYVLNPTTDELKESRLDLVVA
GTEGAVLMVESEADLLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKPKWEWHAPEVNV
ALEQRVQALSEARLGDAYRITEKQERYAQVDAIKDDVVAALQAEDETLDASEILEILGNI
EKNVVRSRVLAGEPRIDGREKDMIRGLDIRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQTIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKASE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISIPRGDISEFAPRIHTLKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVSVKVMEVDRQGRVRLSIKEATVQTQDAAAAASGE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatccgatcgttcgtaaatttcaatatggccagaatactgtcacgttagagacg
ggtatgatggcacgccaggctaccgccgctgtgatggtaagcatggatgataccgcggta
ttcgttaccgtggtcggcgcgaaaaacgccaaacccggccaaaatttcttcccattaacg
gttaactatcaggagcgtacctacgctgccggacgtttccctggtggttttttccgtcgt
gaaggccgtccaagcgaaggcgaaacgctgatttctcgtcttattgaccgtcctatccgc
cccctgttcccagagggtttcctgaatgaagttcaggtgattgcgaccgttgtttccgtt
aacccacaggttaaccctgacatcgttgccatgattggtgcctctgcggcgctgagctta
tcaggaattccttttaacggtcctatcggtgccgcacgtgttggttatttgaatgaccaa
tatgtcctgaacccaacaacagatgaactgaaagaaagccgtctagatttggtcgtcgcg
ggtacagagggcgcggttctgatggtggaatccgaagctgatctgttgagtgaagatcag
atgctaggcgcggtagtgtttggtcacgatcagcagcaggttgttattgaaaatattaat
gctttggttgccgaagcgggtaagccgaagtgggaatggcatgcgcctgaggtcaatgtt
gctttagaacagcgtgtgcaagctctatctgaagctcgtttgggtgacgcgtatcgcatt
actgaaaaacaagagcgctatgcgcaagttgacgccattaaagatgatgtcgttgccgct
ttgcaagctgaagatgaaactttggatgcaagcgagattctggaaatcttaggtaacatc
gagaaaaacgtggtacgtagccgcgtgctggcaggcgaaccgcgtattgatggccgtgaa
aaagacatgatacgtggtctggatatacgcaccggcgtactgccccgtactcacggttcc
gcgttgttcacccgcggtgaaacgcaggcgttagttacagcaacgctgggtacggagcgc
gacgcacagactattgatgagctgaccggagaacgtaccgatcgcttcctgttacactat
aattttcctccctactctgttggtgaaacgggaatggtgggttcaccaaagcgtcgcgaa
atagggcatggtcgcctagccaagcgtggcgtgctggccgtcatgcctaaagcgagcgaa
ttcccgtacaccgtacgtgttgtatctgaaatcacggaatctaatggatcttcttcgatg
gcatctgtctgcggtgcttctctggctctgatggacgctggggttccgattaagtcagcc
gttgccgggatcgcaatggggttagtgaaagaaggcgataactttgttgttctgtccgat
attctgggtgatgaagaccatctgggcgatatggacttcaaagttgctggcagccgtgaa
ggtattaccgcgttacaaatggatatcaagattgaggggattacccgtgagattatgcag
gtagcgctaaatcaggccaaaggtgcacgtttgcacattctgggtgtgatggagcaggct
atcagcattccacgtggcgatatttctgagttcgccccgcgtattcataccctcaaaatt
agcaccgacaagatcaaagacgtaatcggtaaaggtggttcggtgattcgtgcgttgacg
gaagaaacgggcacaaccattgaaattgaagatgatggtacggtgaagatcgcttctacg
gatggcgagaaagcgaagcatgcgattcgtcgaattgaagagattaccgctgaaattgaa
gttggccgcgtgtatcagggtaaagtgactcgtattgtcgattttggtgcttttgtggct
attggcggcggtaaagaaggtctggtacatatttctcagattgccgataagcgtgtagaa
aaagtgaccgactatttacagatgggtcaggaagtctctgtcaaggtgatggaagttgac
cgtcaaggccgcgtgcgcttaagtatcaaggaagccacagtgcaaacccaggatgcggca
gcagctgcttccggagaataa
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