Pectobacterium cacticida: OI450_03935
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Entry
OI450_03935 CDS
T08693
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OI450_03935 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcac03019
]
OI450_03935 (rppH)
Messenger RNA biogenesis [BR:
pcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OI450_03935 (rppH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UYX07566
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All DBs
Position
827811..828344
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AA seq
177 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
RKKDVRVLAFTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNESDINMQSSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFISPVILLQESVATRGTPPSGSRRKRG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgccccaacgtgggtattgtaatttgtaatcggcagggg
caagtcatgtgggcccggcgctatggtcagcactcctggcagtttccgcaagggggaatt
aaccccggcgaaagtgctgagcaggcgatgtaccgcgaactgtttgaggaagtcgggtta
agaaaaaaggatgtgcgtgtattggcatttacccgtaactggttacgctacaaattacca
aagcgtttggtgcgttgggatacaaaaccggtctgtatcggccaaaagcagaagtggttt
ttgctacagttaatgtgcaatgaatcggatatcaatatgcagagcagtagcacgccggaa
ttcgatggctggcgttgggtcagttactggtatccggtacgccaggtcgtttctttcaag
cgtgatgtgtatcgccgcgtgatgaaagaatttatcagcccggtgatattgctccaggag
agtgttgcgacgcgggggactcccccatccggttctcgacgaaaaagagggtag
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