Pectobacterium cacticida: OI450_04390
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Entry
OI450_04390 CDS
T08693
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcac03400
]
OI450_04390
DNA repair and recombination proteins [BR:
pcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OI450_04390
Archaeal homologous recombinant proteins
OI450_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
cobW
SMC_N
NTPase_1
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UYX07646
LinkDB
All DBs
Position
complement(927130..930813)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNALFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNAPDGNLQSPKAELALIE
GGKILCEKLNDKKDMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAALLEELTGTD
IYGLISERVYDKHKQASVALNTLQTRALSIQLLSDEQRQQIENQLAELTQQEQQRNAERE
QTLTALRWFEQLTLQQTRVTHAQAQHTRAESAIQQARSQLDKLANNEPAEKLRPLHQEKE
RYRQESLALAQRIEHLSRSLADKQSELTTLRQQEEKAEQDVSKHKRERQEQERLINEQVV
PLDQRIAMLEQQKNQRQDELAKTQARLHANESKQTQVAAEQRQAKRQLEQIQSYRQQHAH
HQQWGELLPLWRTQFRQLRQLQDDRQKLNHKQAQHMAESTAWQQEADKLAIQLREQQKAV
NAVRQLFTQHDETRQLQDAHQPLSALYQRFNQLMDQQAICRQLATVSDQYQRLQVSKQQH
LAKLVETQDHIDQLEILQKQQQSEHQQRSERLADLETIYRQEMHIVKLEAERQRLQAGEA
CPLCGSTEHPAIERYQALQPSETQRRLTALQQEVNQLTIALANTTAELNARLQQREQLQL
ELAQCDSEHQALLQQWQDVSERLQVTYSLEQQDEIAVWLTEREAEEQAIRQQIAAREQLQ
KQWQESKDLLTAAEALQRELEQKIALNIQQQSSLSVTQQEIDQSLQNVHQQIAQHTQDIT
QTLTTVGLLLPDADTQDGWLAQRDREWQDWKTKEQEQSRLIPLLATLESDLQHLNHNVTE
AKQQCQTQQQQLEQHLALLSANQQARQALFGDRQIATVREQLQRASQQYDDALRLALSAR
QQTETALSRLTGELASTQQQYDQCTRQHESAAERFTLALQQSTFIDETTFLDALLDEQER
QTLQELKETLYQHLQQATALRQQAEQALLEQQQKRPASLTEDITQEAIQQRLVTQDETLK
TNLRQQGELQRQLADDRLQRQSQQTLLNEIAQSQQRYDDWETLNSLIGSSKGDKFRKFAQ
GLTLDHLIYLANLQLARLHERYQLKRKPGGELELLVMDTWQADAERDTKTLSGGESFLVS
LALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHIEAM
KERIPVQINVQKVNGLGISRLASHYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcttaaaaaaccttaacgcgttgaaaggcgaatggaagatc
gatttcacgcaggagcctttttccagcaacgctctattcgccattaccggcccgacaggc
gccgggaaaacgacgctactcgacgccatttgtctggcgttataccacgagacgccacgc
cttgggctgctttccgccagccagaatgatttgatgacgcgtaacaccgcagaatgcctt
gccgaggtcgaatttgaggtcaaaggcgtcggatatcgtgccttctggagccaacgtagg
gcaagaaatgcgcctgatggcaacttacagtctcccaaggccgaactcgcgcttattgaa
ggcggtaaaattctgtgtgaaaagctgaatgacaaaaaagacatgatcacacagctcacc
gggttggatttcggccgctttacgcgatctatgatgttatcgcagggacaatttgccgcc
ttcctcaacgctaaggcggacgatagggcggcacttctggaagaattaacgggtacagat
atctacggcctgatttccgaacgcgtttatgacaagcacaaacaagccagcgtcgcattg
aacacgttacagacgcgcgcactcagtattcaattattgagcgatgaacaacgccagcag
atagaaaatcagcttgccgaactgacgcaacaggagcaacagcgcaacgccgaacgtgag
caaacactgactgcgctgcgctggtttgagcaactgacgctgcagcaaacgagggtaacg
catgcgcaggcgcaacatacgcgcgccgaatccgccatccagcaggccagatcgcagctc
gacaaattagccaacaacgaaccggcagaaaaactgagaccgctacatcaggaaaaagag
cgctaccgtcaggagtctctggcactcgcccagcggattgagcacttgtcccgatcgctg
gccgataagcaaagtgagttaactactctgcgccagcaggaggaaaaggcggagcaagac
gttagcaaacataaacgagagcggcaggaacaagagcgtttgatcaacgagcaggtcgtg
ccgcttgaccagcgcattgctatgctggaacagcaaaaaaaccagcggcaggatgaactg
gcaaaaacgcaggctcgcctgcacgccaacgagtctaaacaaacacaggtcgccgcagaa
caacggcaagctaagcggcagcttgaacagatccaatcttatcgccagcaacacgcacat
caccagcaatggggagagctgttaccgctatggcgtacccaatttcgccagttgcgccag
ttgcaggacgatcgacaaaagctgaaccacaaacaggcacagcatatggcagagtcgacg
gcatggcagcaagaagccgacaagctggcgatacagttgcgtgagcaacaaaaggccgtt
aatgctgtgcgccagctgttcactcaacatgatgaaacgcggcaacttcaggatgcgcac
cagccactttccgctctgtaccagcgctttaatcagctcatggatcagcaggctatatgt
cggcaactcgccaccgtcagcgaccaataccagcgccttcaggtgagcaagcagcaacat
ctcgccaaactcgttgagacacaagaccatatcgaccagttagaaatattgcagaaacag
cagcagtctgaacatcagcaacgcagcgagcgtctggccgatttggaaacgatatatcgg
caggaaatgcatattgttaagctggaagccgaacgccagcggctacaggcgggagaggcg
tgcccgctatgcggctcaacggagcaccccgccatcgagcgctatcaggcattgcaaccg
tctgaaacgcaacggcgtctgacggcactacaacaggaggtgaaccagttaaccatcgcg
ctggcaaacaccactgctgagctgaacgcacgcttacagcagcgggaacagctgcaattg
gagcttgctcaatgcgatagcgagcatcaggctctgctgcaacaatggcaagatgtcagt
gagcgcttacaagttacctactcgctggaacagcaggacgaaatagccgtctggcttaca
gagcgtgaagccgaagaacaggccattcgacagcagattgccgcacgcgagcaattgcaa
aaacagtggcaggaaagtaaggatttactgactgccgcagaggcattacagcgagaactc
gagcagaagatcgcgttgaatatccagcagcaatcctcgctaagcgttacgcaacaagag
atcgatcaatcactgcaaaacgtgcatcagcagatcgcacaacatactcaggacatcacg
cagacgctgacaacggtggggcttcttttgccagacgctgacacacaggatggctggctg
gctcagcgtgacagagaatggcaagactggaaaaccaaagagcaggagcaatctcgctta
attcctctgttagccacgttggaaagcgacctacagcatctgaatcacaacgtgaccgaa
gcaaaacagcaatgccaaacgcagcaacagcagttggaacagcaccttgcgttgctcagt
gcaaaccaacaggcgcggcaggcattgttcggggacagacaaatcgccaccgtgcgcgaa
cagctacagcgagccagccagcagtacgacgatgcgctgaggctagccctatcagctcga
cagcaaaccgaaacggcgttaagccgtctgacgggagagctggctagcacgcagcagcaa
tatgaccagtgtacacgccagcatgagagtgcggccgaacgctttactctggcgttgcag
caaagcactttcattgatgaaaccacctttctcgatgcgctgcttgatgaacaggaacgc
cagacattgcaggaacttaaggaaacactgtatcagcacttgcagcaggcaacggcgctg
cggcagcaggctgaacaggcgctccttgaacagcaacaaaaacgaccagcctctctgacg
gaagacatcacgcaagaagcgatacagcaacggttggtgacgcaggatgaaacgctgaaa
accaatctgcgacaacagggtgaacttcaacgccaattggctgacgatcggctacagcgc
cagagccaacaaaccttgctcaatgagatcgcccaaagccagcaacggtatgatgactgg
gaaacgttaaattcgttaatcggatccagtaaaggggataaattccgcaagtttgctcag
gggttgacgttggaccatctgatttatctcgccaatctccagcttgcacgcctgcacgag
cgttaccagctaaaacgtaagcccggcggcgaactggaattattggtgatggatacctgg
caggctgatgccgaacgcgacaccaaaacgctatccggcggtgagagttttctggtcagc
ctggcgctggcgctggcgttatccgatctggttagtcataaaaccagcattgactcgctc
tttttggatgaaggctttggcacgctggatgccgagacgctggatattgcgctggatgcg
ctggataacctgaatgcatccgggaaaactatcggcgtcattagccatattgaagccatg
aaagaacgcattcccgtgcaaatcaacgtacagaaagttaacggattgggtatcagccgg
ttagcgtcacactacgccgtatag
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integrated database retrieval system
