Pectobacterium cacticida: OI450_04635
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Entry
OI450_04635 CDS
T08693
Name
(GenBank) SmdB family multidrug efflux ABC transporter permease/ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pcac
Pectobacterium cacticida
Pathway
pcac02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OI450_04635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcac02000
]
OI450_04635
Transporters [BR:
pcac02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
OI450_04635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
nSTAND3
AAA_16
AAA_29
AAA_25
DEAD
RsgA_GTPase
DUF87
NB-ARC
DUF8321
Zeta_toxin
MMR_HSR1
AAA_33
DUF8074
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UYX07691
LinkDB
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Position
984995..986770
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AA seq
591 aa
AA seq
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MNSANPFGATLKRLLAYGSPWKKPLLIGVLMLWVAAGAEVSGPMLVSYFIDHLVAKGEFP
LAVAAGLAAAYILLQILAASLHYFQALLFNRVAVGVVQQLRIDVMDAALRQPLSTFDKEP
VGQLIARVTNDTEVVKDLYITVVSTVLRSAALVGAMLVAMFSLNWRMALVALMIFPAVAV
VMVLYHHFSTPIVRRVRSYLANINDGFNEVINGMGVIQQFRQQARFGNKLGTASREHYEA
RMKALRLDGILLRPLLSLFSAMVLCGLLFQFGLNADDAVGVGVLYAFINYLGRLNEPLIE
LTTQQSMFQQAVVAGERIFELMDGKQQRYGDDERPLVTGRIDIDKVSFSYGTEKRVLRDI
SLTIPDRGFVALVGHTGSGKSTLASLLMGYYVPNEGEIRLDGRPLSTLSHTVLRQNVAMV
QQDPVVLAESMFVNVTLGRDISEDAVWRVLEVVQLANLVRDFPEGLHTRIGEQGNNLSTG
QKQLLAIARVLVQPPKILILDEATANIDSGTEQAVQKALRIIREQTTLVIIAHRLSTIVE
ADMIMVLHHGQAVERGTHKQLLQQQGRYYQMYQLQLAKEDLAAISAESCPV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgccaacccgttcggggcaacgttgaaacgcctgttggcctatggttcacct
tggaagaaaccgctattgattggggttttgatgttatgggtcgccgctggcgcagaggtc
tcaggccccatgttagtaagctattttatcgaccatttggtggctaaaggtgaattcccc
ttggcagtggcggcggggctagccgcggcctatatcctgctgcaaatactggcggcttca
ctacactattttcaagcgctgttgttcaaccgcgtcgcggtgggggttgtgcagcaacta
cgtattgatgtaatggatgctgcattgcgtcagccgctgagtaccttcgacaaagagcct
gtcgggcagttgattgcacgcgtcaccaatgacactgaagtcgtgaaagatctgtatatc
acggtagtttcgactgtgctacgcagtgcggcactggttggcgcgatgttggtagccatg
tttagtttgaactggcggatggcgctggttgcgttgatgatttttcccgcggtagccgta
gtcatggtgctttaccatcactttagtacgcctatcgtgcgtagagtaagaagctatctg
gccaatattaatgacggttttaacgaagtgattaatgggatgggggtcattcaacagttt
cgtcagcaggctcgctttggcaataagttaggcaccgccagtcgtgaacattatgaagcg
cgtatgaaggcgttgcgtctagatgggattctactcaggccgttgttgagcttattttct
gcgatggtgttatgtggtttattgtttcagtttggtcttaacgctgatgacgcggtaggg
gtcggtgttttgtacgcatttatcaactacctgggtcgtctgaatgaacctttgattgag
ctgacaactcagcagtctatgtttcagcaggccgtggtcgccggagaacgtatctttgaa
ctaatggacggcaaacagcagcgctatggcgatgatgaacgccctttggttacgggacgt
atcgatatagacaaggtctcattctcctatggcacagaaaaacgcgtattacgggatatt
tccctgacgataccggaccgtggttttgttgcgctggttgggcatacaggcagcggcaaa
agtacgctggcaagcctgttgatgggatattatgtgccgaatgagggagagataagactt
gatggacgtccgctatcgacgctgtctcacaccgttttgcgccaaaatgtggcaatggtg
caacaagacccagttgtgctggcggagtccatgtttgtcaatgtgacgttggggcgtgat
atcagtgaagatgccgtctggcgcgtgctggaagtcgtgcagcttgctaatctggttaga
gatttcccagaaggcttgcatacgcggattggtgagcaggggaataacttatctacagga
cagaaacagctgctagcgattgcgcgagtcttagtgcaaccgcccaaaatcctgattctc
gatgaggccacggcaaatattgattcgggtacggagcaggcggtgcaaaaagcattgcgt
attatcagggagcaaacgactttggtcatcattgcacaccgtctttccactattgttgag
gccgacatgattatggtgctccaccatggtcaagccgttgaacggggaacgcataagcaa
ttgttgcaacaacaagggcgttactaccaaatgtatcaattgcagcttgccaaagaggat
cttgccgcaattagcgcggaatcttgcccagtctaa
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