Pectobacterium cacticida: OI450_06675
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Entry
OI450_06675 CDS
T08693
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pcac
Pectobacterium cacticida
Pathway
pcac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OI450_06675 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcac03400
]
OI450_06675 (uvrB)
DNA repair and recombination proteins [BR:
pcac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OI450_06675 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OI450_06675 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
PRDA1_C
DUF87
Msl2-3_C
Motif
Other DBs
NCBI-ProteinID:
UYX08042
LinkDB
All DBs
Position
1398280..1400292
Genome browser
AA seq
670 aa
AA seq
DB search
MSKVFTLHSDFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MMLAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YSRNDQAFQRGTFRVRGEVIDIFPAESDDVALRVELFDEEVERLSLFDPLTGHVLQTVPR
YTIYPKTHYVTPRERILQAMEEIKVELADRRKVLLANNKLVEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLRGKAILYGDKITPSMAKAIGETERRREKQQAYNTEHGIVPQGLNKKISDILQLG
QPTNKGKGRTNRKAAEPAARYELMTPKALELKIRELESKMLAHAQNLEFEEAAALRDEVQ
ALRAQFIAIS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtatttacactgcattccgactttaaaccagcgggcgaccagcctgaagcc
attcgtcgtttaaaagaaggattggaagacgggttagcgcaccaaacgctgcttggcgtg
acgggatctggcaaaacgtttaccatcgcgaatgtgattgccgaccttaatcggccgacc
atgatgctggcgcctaacaaaacgctggcggcccaattgtatggggaaatgaaggccttt
ttccccaacaatgccgtcgagtacttcgtctcgtactacgactattatcagccggaagcc
tatgttccgagctccgacacctttattgagaaagacgcctcggttaacgaacacatcgaa
cagatgcgtctttccgccaccaaagcgctattggaaaggcgcgacgtgatcgtcgtggct
tccgtctcggcgatctatggtctgggcgatcccgatctctatctgaaaatgatgctgcac
ctgacgcaagggatgctgattgaccagcgcgcgattttgcgacgtctggccgagttgcag
tattcccgcaacgatcaggcgtttcagcgtggtaccttccgcgtacgcggcgaagtgatc
gatattttccctgcggaatccgacgacgtcgcgctgcgggttgaactgtttgatgaagaa
gtggaacggttgtcgctgtttgacccgctgacgggacacgttctccagacggtgccgcgc
tataccatctatcctaaaacgcactacgtgacgccgcgggagcggattttacaggcgatg
gaagagattaaagtcgaattggccgatcgccgaaaagtgttactggcgaataataagctg
gtggaggagcagcggctgagccagcgtacgcagttcgatctggaaatgatgaacgaactg
ggctactgctccggcattgaaaactactcgcgctacctgtccgggcgtggccccggtgaa
ccgccaccgaccctgtttgactatctgcctgccgatggactgttagtcatcgatgaatcc
cacgtcaccgtcccgcaaatcggcggtatgtatcgcggcgaccgcgcgcgcaaagagacg
ctggtcgaatatggtttccggctcccttcggcgctggataaccgtccgatgaaatttgag
gaattcgaagcgttagcgccgcaaacgatctatgtgtccgcgacgccgggtaactatgag
ctggaaaaatcgggtggtgaagtgatcgatcaggttgttcgccccactggattactcgat
ccgattattgaagtgcggccggtggcgacacaggttgacgacctgctttccgagattcgc
cagcgtgccgcgattaacgaacgcgtgctggtcacgacgttgaccaagcgcatggcggaa
gacctaacggaatatctggaagagcacggtgagcgggtacgctatctgcactcggatatt
gataccgttgaacgtgtggagattatccgtgatttacgccttggcgagttcgacgtgttg
gtgggtatcaacctgttgcgtgaagggttggatatgccagaagtgtcgctggtggcgatt
ctggatgccgataaggaaggctttctgcgttccgagcgttcgctgatccaaaccattggt
cgtgcggcgcgtaacctgcgtggtaaggcgattctctacggtgacaagattacgccatcc
atggcgaaagcgattggcgaaacggaacgccgccgtgaaaagcagcaggcgtataatacc
gaacacgggattgtgccgcaggggcttaataagaaaatttccgatattcttcaattgggt
cagccgacaaacaaaggcaaggggcgtactaaccgtaaagcggcagaacccgctgctcgt
tatgaactgatgacgccgaaggcgctggaactgaaaatccgcgagttggaaagcaaaatg
ttggcacacgcgcagaaccttgaatttgaagaggcagccgccttacgcgacgaggtgcag
gcactacgcgcacaatttatagcgatatcctaa
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