Pectobacterium cacticida: OI450_07265
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Entry
OI450_07265 CDS
T08693
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcac03009
]
OI450_07265 (rimO)
Enzymes [BR:
pcac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OI450_07265 (rimO)
Ribosome biogenesis [BR:
pcac03009
]
Prokaryotic type
ribosomal protein modification factors
OI450_07265 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
UYX08146
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Position
complement(1521150..1522463)
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AA seq
437 aa
AA seq
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MQHSRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLAHVHRYVPKPVHNP
FTSLVPAQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGADVKQRIGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVDKTLERIKRWREICPELTLRSTF
IVGFPGETEDDFQMLLDFLKEAKLDRVGCFKFSPVEGAAANALPDQVPEDVKETRFHRFM
QLQQAISAQRLQDKIGRNLLVLIDEVDGEGAIGRSMADAPEIDGTVYLNGETGVSVGDIV
NVKIEYADEYDLWGSRI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacactcccgtattggctttgtttccctcggctgcccgaaaaatctcgtcgactcc
gagagaatcttgaccgaactgcgtactgaaggctatcaggttgtccctcgttatgatgat
gctgaactggtgatcgtcaatacctgcggttttattgacagcgcggttcaagagtcgctg
gaagccatcggcgaagcgctgaatgagaacggaaaagttatcgtaacgggctgtttgggc
gccaaagaaaaccaaatccgcgaagttcaccccaaggttctggaaattaccgggccgcac
agctacgagcaagtgctagcgcacgtacatcggtatgtcccaaagccggtacataatccc
tttacgagtttagttcccgcacaaggcgtgaaactgacaccgcggcattacgcctatctg
aaaatttcagaaggctgtaaccatcgctgtacgttttgcatcatcccttccatgcgcggc
gatcttgatagtcggccaatcggctcggtgctggatgaagcgaaacgtttggttgatgct
ggcgttaaagagctgctggtaatctcacaagatacatccgcatatggcgccgatgtgaag
cagcgtatcggtttctggaatggtcaaccggtcaagaccagcatggtaagcctgtgtgaa
caattagcgtcgctgggggtgtgggttcgcctgcactatgtctacccttacccgcatgtt
gacgacgtgattccgctcatggcggaaggcaaaatcctgccttatctggacattcctctc
cagcacgccagcccaaaaattcttaaactgatgaagcgcccaggcgcggtagacaaaacg
ctggaacgcattaaacgctggcgtgaaatttgcccagaattgacgctacgctcgaccttt
attgtcggctttcccggcgagacagaagacgattttcagatgctgctcgacttcctgaag
gaggctaaacttgaccgcgttggctgtttcaaattcagtccggttgagggcgcagcggct
aacgcattacccgatcaggtgccggaagacgttaaagaaacgcgttttcaccgctttatg
caacttcagcaagccatctctgcccaacgattacaggataaaattggccgtaacctgctt
gtgctgatcgatgaagttgatggagaaggagccattggccgcagtatggcggatgcgcca
gagatagacggcacggtttatctgaacggtgagacgggggtgagcgtcggtgatatcgtc
aacgtaaaaattgaatacgcagacgagtatgatctttgggggagccggatttaa
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