Pectobacterium cacticida: OI450_07875
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Entry
OI450_07875 CDS
T08693
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
OI450_07875 (ltrA)
Enzymes [BR:
pcac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
OI450_07875 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
Motif
Other DBs
NCBI-ProteinID:
UYX08253
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Position
1669298..1670764
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AA seq
488 aa
AA seq
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MTQATSQCGAPSASSLWSSIDWRQVEDNVFRFQMRIAKATKAQRWNKVRVLQRLLTRSHQ
AKLLAVRRVTSNRGRNTSGIDGTRWINPQQKWQAALALSCRGYQAQPLRRIHIPKKNGKT
RPLGIPTMHDRAMQALFLLATEPVAESTADHHSYGFRPKRSAADAIERCFVVLVQRSSAQ
WILEGDIKGCFDNISHDWMLRHLRIERKILAQWLKAGFVEKGQLFSTVAGTPQGGIISPC
LANGVLDGMELMLKSITKPTDKVHLVRYADDFVITGSSKEQLENIIKPAVTGFLRERGLT
LSEEKTAIVSITQGFDFLGFNVRKYGSKLLIKPAKSSIKSFLDVIRKEIRAGIALPTASL
IGLLNRKITGWVNYYHHVVAKAVFSKIDTAIFWALYRMIRRKHSRKSKGWLYRKYYGNRG
MRRWIFHSVYQVKSGESRIISLKQASATPVRRHRQIRSAANPYDVEYLDYFKERMRKYPP
QQEVAGSE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggccacaagccagtgcggtgcgccttcagcatcatctctgtggtcatcgatc
gactggcgacaggtcgaagataatgtatttcgatttcagatgcgtatcgccaaggcaacc
aaagcacaacgctggaataaagtgcgtgtgctccagcgacttcttacccgatcccatcag
gcgaagctgctggctgtaaggcgcgtgacgtctaaccggggacgtaacacgtcgggcatc
gacggaacgcgatggataaacccgcaacaaaagtggcaggccgctctggcattgtcctgt
cggggttatcaggctcagcctctaagacgtatccatattcccaaaaagaacggcaaaaca
aggccgttggggatccctactatgcacgatcgcgccatgcaggcactctttctgttagca
acagagcccgtggcggaaagcacagccgatcaccattcgtatggttttcgaccaaaacgc
tcagccgcagacgcaatagagcggtgttttgttgtgctggtacaaagatcatcagcacaa
tggatcctcgaaggggatattaaaggctgctttgataacatcagccacgactggatgtta
aggcatcttcgcatcgagcgtaagatacttgcgcaatggctgaaggcaggctttgtcgag
aaaggacagcttttctccaccgtagcaggaacgccacagggtggcatcatctccccctgt
ctggctaatggtgtattggacggtatggaattgatgctgaaaagcatcacaaaacccaca
gacaaagtgcacctggtcaggtacgccgatgattttgtgataaccggtagctcgaaagag
caactggaaaacatcatcaaaccggcggtaacaggcttcctcagggaaagagggctgacg
ctatctgaagagaaaacggcgatcgtatcgatcactcagggattcgattttctggggttt
aatgtacgcaagtacggcagtaaattgttgattaaacctgcgaaaagcagtatcaaatcc
ttccttgatgttatcagaaaagagatcagagcaggcattgcgctacctacagcttcgtta
ataggcttgctcaaccgtaaaataacaggctgggtaaactattatcatcatgtggtggca
aaagcggtcttcagtaaaatcgacaccgccatcttttgggctctttatcgcatgataagg
cgaaaacatagcaggaaatcaaagggctggctttaccgaaagtattacggtaacagaggg
atgcgtcgctggatatttcactcggtctatcaggtgaagagtggcgaaagcaggataatt
agcctgaaacaagcctcagcaacgccagtacgacgtcaccgacaaatccgttcagccgcc
aatccctacgatgtggaataccttgattactttaaagagcgaatgcggaaatatcctcca
cagcaggaggttgccgggtcagagtaa
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