Pectobacterium cacticida: OI450_07925
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Entry
OI450_07925 CDS
T08693
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pcac
Pectobacterium cacticida
Pathway
pcac02020
Two-component system
pcac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OI450_07925
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OI450_07925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcac03021
]
OI450_07925
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcac02035
]
OI450_07925
Transcription machinery [BR:
pcac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OI450_07925
Bacterial motility proteins [BR:
pcac02035
]
Flagellar system
Flagellar assembly proteins
Stator
OI450_07925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
UPF0147
DUF1542
DUF2730
UPF0122
Motif
Other DBs
NCBI-ProteinID:
UYX08259
LinkDB
All DBs
Position
1677700..1678422
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGTMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLSAVERYD
SLQGTAFTTYAVQRIRGSMLDELRSRDWAPRSVRRNAREVAQAMQQAEQQLGRAPTEQEV
AQALNISLEDYRQILLDTNNSQLFSYDEWREEHGDSAEALLEGNEEANPLYQLMEGSLRN
RVMDAIDSLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRVKLMNDV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatttgtataccgccgaaggcacaatggataaaaattccctttggaagcgctat
gttcctctggtgcgccatgaagccttgcgtttacaggttcgtctccccgcgagtgttgag
cttgacgatctgctgcaagcagggggtatcggtttgctcagtgccgtcgaacgctatgat
tcgttacaaggtacagcatttacaacctatgccgttcaacggatccgtggttcgatgttg
gatgaattacgtagccgtgactgggctccacgcagtgtgcggcgtaatgcgcgggaagtg
gcacaggcaatgcagcaggctgaacaacaacttggccgagcgccaacggagcaggaagtg
gctcaggctctgaatatttcgcttgaagattatcgacagatattgctggatacgaataac
agccagcttttttcttacgatgaatggcgtgaagagcatggtgatagtgctgaggcccta
ttggaaggcaacgaagaggcgaatccactttatcaactcatggaaggcagtttacgcaat
cgcgtcatggatgcgatcgatagccttccagaacgtgagaaactggtattgacgctttat
tatcaggaagaattgaacctgaaagagatcggtgctgttcttgaagtaggggagtctagg
gtcagtcagttgcatagccaggcgataaagcgtctacgtgtgaaattaatgaatgatgtt
taa
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integrated database retrieval system
