Pectobacterium cacticida: OI450_10375
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Entry
OI450_10375 CDS
T08693
Name
(GenBank) MurR/RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcac03000
]
OI450_10375
Transcription factors [BR:
pcac03000
]
Prokaryotic type
Helix-turn-helix
Other families
OI450_10375
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_24
MarR
HTH_Tnp_ISL3
Penicillinase_R
HTH_Crp_2
PA-IIL
HTH_29
TrmB
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UYX05394
LinkDB
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Position
2240901..2241773
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AA seq
290 aa
AA seq
DB search
MNMLDKIQSHLELLSKSERKVAEVILSAPQTAIHSSIATLAQMADVSEPTVNRFCRRLET
KGFPDFKLHLAQSLANGTPYVNRNVEEDDGVDAYTSKIFESAMAGLEQVKSSLDIAAVNR
AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMSCMNSGDGDVVV
LISHTGRTKSLVEMAQLARENDATVIAITSDDTPLAHEASLALRLDVPEDTDVYMPMVSR
LAQLTLIDVLATGFTLRRGEKFRDNLKRVKEALRESRFDKDAGLMNPFRR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggataaaatccagagtcatttggaactcttaagcaaatcagaaagaaaa
gttgctgaagtgatcctgagtgcgccgcagacagccattcactccagcatcgccactttg
gcacaaatggctgatgtcagcgagcctacggttaatcgtttctgtcgccgccttgaaacg
aaagggtttcctgattttaaactacatttggcgcaaagtctggcaaacggtacgccctat
gtgaatcgtaacgttgaagaagatgacggcgttgacgcctataccagtaaaatatttgaa
tccgctatggcgggtctggagcaggtaaagtccagcctcgatattgcggctgtcaaccgc
gccgtagatttactgacgcaggcgaaaaagatctctttctttggcctgggcgcttcagcc
gcggtcgcacatgatgcgatgaataaatttttccgtttcaacattcctgtcgtctatttc
gatgatattgtgatgcagcgcatgagctgcatgaattccggcgacggcgatgtcgtggtg
ttgatatcccataccggcagaactaaaagcctggtcgaaatggcgcaactggcgcgcgag
aacgacgcgaccgttatcgccatcacctcagacgatactccgttggcgcacgaagcctcg
ctcgcgttacggcttgatgtgccggaagataccgatgtttatatgccgatggtgtcgcgc
ctcgcccagttgacgctgatcgatgttctggcaacggggttcacgctacggcgtggagaa
aaatttcgtgataacctaaagcgggttaaagaggctctgcgcgaatcacgctttgataaa
gacgcagggttaatgaatcccttcaggcgataa
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