Pectobacterium cacticida: OI450_11140
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Entry
OI450_11140 CDS
T08693
Name
(GenBank) LuxR family transcriptional regulator
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
pcac
Pectobacterium cacticida
Pathway
pcac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OI450_11140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcac03000
]
OI450_11140
Transcription factors [BR:
pcac03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
OI450_11140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UYX05537
LinkDB
All DBs
Position
2397662..2398399
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AA seq
245 aa
AA seq
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MSIFCSDNEIINNTIKNALGRKLKQYGDVKYAYMIMNKKNPSQVVIISNYPSQWVSTYKE
NNYQHIDPVILTAINKVAPFSWEDNIVINSKLKFSKIFNLSKEYDIINGYTFVLHDNNNN
LATLSIMFEEHSPTDIENVIENNKDKLQMLLITIHEKITSLYKEITQNPQNRKQNDKAIF
SQRENEILYWASMGKTYPEIALILDIKISIVKFHIGNVVKKLGVLNAKHAIRLGVELQLI
RPAPL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttttgctctgataacgaaattatcaataacacgattaagaacgccctcgga
cgaaagttaaagcagtatggcgacgtgaagtacgcttacatgatcatgaacaaaaagaat
ccttcgcaggtcgtgattatctcaaattatccatcgcaatgggttagcacctacaaagaa
aataattatcaacatattgaccccgtcattttgacggcaataaataaggtcgcgccattt
tcctgggaagataacatcgttattaactctaaattgaaattctccaagattttcaattta
tcgaaagaatacgatattattaatggctacacttttgttttgcatgacaataataacaac
ctggcgacgctatcgattatgtttgaggaacattcccccacagatattgaaaatgtcatt
gagaataataaagataaactgcaaatgttgcttattaccattcacgaaaaaataacctct
ctttacaaagagataacacagaatcctcaaaacagaaaacaaaatgataaagcgatcttt
tcccagcgtgaaaatgaaattctttattgggccagtatgggaaaaacttaccccgaaatc
gcattaattttggatataaaaatcagcatcgtaaaatttcatatcgggaacgtagtcaaa
aaactgggcgtgctcaatgccaaacatgccatcaggttgggcgtagaattacaactcatc
agacccgcaccgttataa
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