Pectobacterium cacticida: OI450_12705
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Entry
OI450_12705 CDS
T08693
Symbol
rlpA
Name
(GenBank) endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcac01011
]
OI450_12705 (rlpA)
Enzymes [BR:
pcac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OI450_12705 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcac01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OI450_12705 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
UYX05808
LinkDB
All DBs
Position
2744599..2745654
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AA seq
351 aa
AA seq
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MRKDWLWIGVATLALAACTTTEQRPPVSPVAQVYHGPVEEIGGVEPRYEPYNPGTLQDYS
VNGKRFKIVKNPQNFSETGLAAWYGEEASGNRTSIGEIFDPNAITAAHPTLPLPSYVRVT
NLSNGRRLVVRVNDRGPYTPGRIIDLSKAAGDRLNISNNTKVKVDFINVAPDGTLSGPGT
VGTTVAKQSFALPERPNFGASGLGTPIMEPTAPLSNRAVQPVSDSGQDAPAVASSQNGGG
FLGAPSALRPGVLESSVVVPATTSPTTSSISTSTGRYVVQVGALSDRLRAQNWQRSLSER
FDVPGSVATSGGLHRVQLGPFQHRQQAVVLQQRLSAEAQQQSFITTAPTVH
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaggattggctttggattggggtagcaactctggcgctggcggcttgtaccaca
acggaacagcgtccgcctgtgtcacccgtcgcccaggtttatcatggcccggttgaagaa
atcggtggggttgaacctcgatacgaaccctacaaccctggaacgctgcaagactacagc
gttaatggcaagcgctttaaaatcgtcaaaaatccacaaaattttagtgaaaccggttta
gccgcctggtatggcgaagaagcgagtggtaatcgtacatccattggtgaaatcttcgac
cctaacgcgataaccgccgcgcacccaacgttgccgctgccgagctatgttcgcgttacc
aatttaagcaacggtcgccgcctggtcgtacgcgtaaacgatcgcgggccctatacgcct
gggagaattatcgatctatcgaaagcggcaggcgatcggctcaatatctctaacaatacc
aaagtaaaggtggatttcattaacgttgcgccagacggcacgctctcaggccccggcacc
gtgggcacaaccgtcgctaagcagagcttcgccttgccagagcggcctaactttggcgcc
agcggactcgggacgccgatcatggaacccaccgcccccctctctaatcgcgccgtgcaa
ccagtcagcgatagtggtcaggatgcgccagccgttgcttcgtcgcaaaatggcgggggg
tttttaggtgcgccttccgcattacgccccggtgtgcttgagtccagtgttgtggtgcca
gccactacatcgccaacgacgtcctcaatatccacgtctacaggacgttatgtggttcag
gttggcgcgcttagcgatcgcttacgcgcgcaaaattggcaacgcagtctgagtgaacgc
tttgatgtccccggtagcgtcgcaactagcggcggactgcatcgcgttcagctcggccca
ttccaacaccgccagcaagccgttgtacttcaacaacgtttatccgccgaggcgcaacaa
caatcatttattaccacggccccaacggtgcactag
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