Pectobacterium cacticida: OI450_13430
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Entry
OI450_13430 CDS
T08693
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcac03000
]
OI450_13430
Transcription factors [BR:
pcac03000
]
Prokaryotic type
Helix-turn-helix
Other families
OI450_13430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
sCache_like
Motif
Other DBs
NCBI-ProteinID:
UYX08699
LinkDB
All DBs
Position
complement(2923656..2924813)
Genome browser
AA seq
385 aa
AA seq
DB search
MASYHLNAKMAQDIVARTMQIIDSNINVMDARGKIIGSGDQERLGELHEGALLALSQGRV
VDIDDAVARHLHGVRPGINLPLRIDGEIVGVIGLTGNPGQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLIRTDELSPALMEWAQRLGIDLNKPRVAAVIEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSHGRWDAEEHRRRVDTLMSRMAE
SSRLRVRLALGNYFVGSGSIARSYRTARTTMSVGKQRMPAQRCYYYQDLMLPVLLDSLRG
GWQANELVRPLAKLKAMDSNGLLRRTLGAWFRHNVQPGVTAKALFIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYIALQLDEED
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatcatctcaatgccaagatggcgcaggacatcgtcgcgcgaaccatgcag
attattgatagtaatatcaatgtgatggacgcgcgcggtaaaattattggcagtggcgat
caggaacgattaggggaactgcacgaaggggcgctgctggcactctcgcaagggcgcgtt
gtcgacattgatgatgccgtggctcgccacctgcacggggtacgtccgggcatcaattta
cccctgcgcattgatggtgaaattgtcggtgttatcggcttgaccgggaacccgggccaa
ctgcgacaatacggagagctggtctgtatgacggcggaaatgatgctggaacaggcgcga
ctgctgcatatgctagcccaagatagccgtttgcgagaagagttggtgttaaacctgatt
cgtaccgatgagctctctcccgcgctcatggagtgggcgcagcgtttaggcatcgatctg
aataagccccgcgtcgcagcggtgatcgaagttgacagtggacagcttggcgtagactcc
gccatggccgagctacagcagttgcagacgttgctaacgacgccggagcgtgacaatctg
atcgccatcgtatctctgacagaaatggtggtgctgaaaccggcgctgaacagccatggt
cgttgggacgcagaggaacaccggcgtcgcgtggacaccttgatgtcgcgtatggcggaa
agcagtcggctacgggtgaggttagcgctggggaactattttgtcggttctggcagcatc
gcgcgttcttaccgcacggcgcgaaccacgatgagcgtgggtaaacaacgtatgcctgcc
cagcgctgttattactaccaggatttgatgttgcccgtattgctggacagcctgcgcggc
ggttggcaggcaaacgagctggtgcgcccgctggcaaaacttaaggcgatggacagcaac
gggctgttgcgccggacgttgggtgcctggtttcgccataacgtacaacccggagtaacg
gcaaaagcgttgtttattcatcgtaatacgctggaatatcggctcaatcgcatttcagag
ttaacggggctagatctggggaatttcgacgatcgcctgctgctgtacatcgctttgcaa
ctggatgaagaagactag
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