Pectobacterium cacticida: OI450_13700
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Entry
OI450_13700 CDS
T08693
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcac03021
]
OI450_13700 (rpoS)
Transcription machinery [BR:
pcac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OI450_13700 (rpoS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UYX05975
LinkDB
All DBs
Position
complement(2980135..2981127)
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AA seq
330 aa
AA seq
DB search
MSQSTLKVNELHEDSDFDENGLDVFDDKALADEDTNDNDLAEDELLSQGVPQRVMDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDIPSRRRMIESNLRLVVKIARRYNNRGLALLDLI
EEGNLGLIRAVEKFDPEKGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDRPVDDVNRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQNNDMKQNIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQVQGLSIEELFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtacgctgaaagttaacgagttacatgaagattccgatttcgacgaaaat
gggcttgatgttttcgatgataaagcgctggcagatgaggataccaatgataatgacttg
gcggaagacgagctattatcgcaaggtgttccacagcgcgttatggatgcgacgcaactt
tatttaggagaaattggctattcgccgcttttaaccgcagaagaagaagtttattttgcc
cggcgcgcgttacgtggtgatattccatcgcgccgtcggatgatcgaaagtaatcttcga
ttggtagtaaaaattgcccgccgttacaacaatcgtggtctggcattgctagatctgatt
gaagaaggaaatttggggttgattcgtgcggttgaaaaattcgatcctgaaaaagggttt
cgtttttcaacctatgcaacctggtggattcgacagacgattgagcgagccatcatgaat
caaacccgtaccattcgtttacccatccatattgttaaagaactcaacgtctatttgcgc
actgcccgcgaattgtctcataaactggatcatgagccgagcgcggaagaaatcgccgaa
caactcgataggcctgttgatgacgttaaccgtatgttgcgcctgaatgaacgtataacc
tccgtggatactccgctgggtggtgattcggagaaagcgttgctggatattttggcagac
gaaaaagacaatgggccagaagacaccactcagaataacgatatgaaacagaatatcgtt
aaatggttgtttgagcttaatgctaaacagcgggaggtgctggcgcgtcgttttggactg
ctagggtatgaagcggctacgttggaggatgtggggcgcgaaattggtttaacgcgtgaa
cgtgttcgtcagattcaggttgaaggcttacgccgtctgcgggaaatcttgcaggtacag
gggctgagcattgaagagctgttccgcgaataa
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