Pectobacterium cacticida: OI450_16830
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Entry
OI450_16830 CDS
T08693
Name
(GenBank) polysaccharide lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac00040
Pentose and glucuronate interconversions
pcac01100
Metabolic pathways
pcac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OI450_16830
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OI450_16830
Enzymes [BR:
pcac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
OI450_16830
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
UYX06538
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Position
3695313..3696440
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AA seq
375 aa
AA seq
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MKYLLPSATAGLLLLATQPALAAYTGGYATTDGGNVAGAVHKTARSMQDIIDIIAEARLD
SKGKKVKGGAYPLVITYNGNEDALINAAEKDICSQWKKDARGVQIKEFTKGITIIGTNGS
SANFGLWLIKSSDIVIRNMRFGYMPGGAQDGDAIRIDNTPNVWIDHNEIFAKNFECPGTK
DGDTTFEAAVDIKKASTNVTVSYNYIHGIKKVGLSGFSSSDTGRDLTYHHNVYRDVNARL
PLQRGGKVHAYNNLYTEVTSSGLNVRQKGIALIERNWFENAKNPVTSRYDGSNFGTWDLR
NNNIMSPADFAKYNITWNKDSKPYVNAEDWKSTGTFPAVPYRYSPVSAQCVKDKLENYAG
VNKNLAELTAADCNA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatctactaccttctgcaaccgctgggttgttattacttgcgacgcaaccagct
ctggcagcatacacaggcggttatgcgactacggatggaggtaatgtcgccggtgccgta
cataaaacagcacgatctatgcaagatatcattgatatcattgcggaagcgaggctggat
tccaaaggtaagaaagttaaaggcggggcttacccgctcgtgattacctataacggtaat
gaagatgcgctgattaacgccgcagagaaagatatttgtagccagtggaagaaagatgcc
cgtggtgtacaaattaaagaatttaccaaagggattaccatcatcggcaccaatggttca
tccgccaattttggcctttggctgataaaatcctccgatatcgtcattcgtaacatgcgt
tttggttacatgcctggcggcgcacaagatggcgacgcgattcgtatcgataatacgcca
aacgtctggatcgaccacaacgagatctttgctaaaaatttcgaatgtccaggtactaaa
gacggtgatactacatttgaagccgccgttgacatcaagaaagcctctaccaatgtcacg
gtgtcatataactacattcacggtatcaagaaagtagggttaagcggattcagtagcagc
gataccggacgcgacctaacttaccaccacaatgtctatcgcgatgttaacgcccgcctt
ccgctgcaacgagggggtaaagtccatgcctacaacaacttgtatactgaggtcaccagt
tctggtttgaacgtgcgtcagaaggggatcgcgcttatcgaacgcaactggttcgaaaat
gcgaaaaacccggtcacctcgcgttacgacggctccaacttcggcacttgggatctccgg
aataacaatattatgagcccggctgatttcgctaaatacaacattacttggaataaggat
tccaagccttatgtgaacgccgaagattggaaaagcaccggcacgttcccggctgtcccg
taccgctactctcccgtttcggcacagtgcgtgaaggacaaattggagaactacgcgggc
gtgaataaaaatcttgcggagctgacagcagcagattgtaacgcgtag
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