Pectobacterium cacticida: OI450_17325
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Entry
OI450_17325 CDS
T08693
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OI450_17325 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcac03019
]
OI450_17325 (recQ)
03400 DNA repair and recombination proteins [BR:
pcac03400
]
OI450_17325 (recQ)
Enzymes [BR:
pcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OI450_17325 (recQ)
Messenger RNA biogenesis [BR:
pcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OI450_17325 (recQ)
DNA repair and recombination proteins [BR:
pcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OI450_17325 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UYX06626
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All DBs
Position
3799981..3801804
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AA seq
607 aa
AA seq
DB search
MSTAEVVNKETLAVQVLRDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLQAYGVAAACLNSTQTREQQFEVMAGCRSGQIKLLY
IAPERLTTDSFLDHLAHWQISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIAL
TATADETTRNDIVRLLDLRSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQGQRGKSGI
IYCNSRSRVEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGPQ
LEIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQPCGNCDICLDPPKRYDGLIEAQKAL
SCVYRVGQRFGLGYVVEVLRGANNQRIREFGHDKLPVYGIGKDKSQEHWVSVLRQLIHLG
LLSQNITLHSALQLTEAARPVLRGEVALQLAVPRVINLKPRIMQKSYGGNYDRKLFAKLR
KLRKSIADDNNIPPYVVFSDATLLEMAESMPITAGELLTINGVGHRKLERFGAPFMNVIR
DHVDNGD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggaagtagtgaataaggaaacgctggcggttcaggttctacgggacacg
ttcggctaccagcagttccgaccgggccagcaggaaattatcagcgcgacgctcagtggg
caggattgtctggtgattatgccaacgggcggcggtaaatcgctgtgctaccaaattccc
gcgttggtgatggatgggctgacgctggtggtgtccccactgatttcactgatgaaagat
caggtcgaccaactccaggcttacggtgttgcggcggcgtgtcttaattctacgcagacg
cgcgaacagcagtttgaggtgatggcgggctgccgtagcggtcagatcaagctgctttat
attgcgccggaacgtctgacaacggacagttttctcgatcatctcgcccactggcagatt
tcgctgattgcggtggatgaagcgcactgcatttcccaatgggggcacgatttccgcccc
gagtatcgcgcgttaggccagattaaacagcgttttccccatcttccttttatcgcactg
acggcgacggccgatgaaaccacgcgtaacgatatcgttcgtctgttggatctccgatcg
ccgctgattcagattagcagtttcgatcgcccgaatattcgctatacgctggtggagaag
ttcaaaccgctcgatcaactgtggatgtttgtacaagggcagagggggaaaagcggcatt
atttattgtaacagccgctctcgcgtggaggacatttgcgcacgtttgcaggctcgcggg
ctgagcgccggggcgtatcacgccgggctggataacgaacggcgggcgcaggtgcaagaa
gcgtttctgcgtgacgatcttcaggtagtggtggcgaccgtggcctttggtatggggatc
aacaaaccaaacgtgcgatttgtggtgcattttgatatcccgcgtaacattgagtcctac
tatcaggaaacggggcgcgccgggcgtgacggcctggccgccgaagccgcgctgttctac
gatccggcggatatggcatggctacgtcgctgcctggaagagaaacccgccggcccgcag
ttagagatcgagcgccataagctcaatgccatgggcgcgtttgccgaagcgcaaacctgt
cgccgtctggtgctactcaactatttcggcgaaggacgccagcaaccctgcggtaactgc
gatatttgtctcgatccaccgaaacgttatgacgggctgatagaggcgcaaaaggcgctc
tcctgcgtgtaccgcgtcggccagcgttttggtttagggtatgttgtcgaggtgttacgc
ggggcgaataaccaacgtattcgggaatttggccatgataagttgccggtttacggtata
ggcaaagacaaatcgcaagagcattgggtcagcgtgctgcgccaattgattcatctgggt
ttactgagccagaacatcaccctgcattccgccttacaactgaccgaagcagcgcgtccg
gtattgcggggagaggtcgcgctgcaactggccgtgccgcgcgtcatcaatttaaaaccc
cgcatcatgcagaagtcttacggcggcaattacgaccgtaagctgtttgccaaattgcgt
aaattgcgcaaatccatcgcggatgataacaatatcccaccttacgtggtgttcagcgac
gcgacgttgctagagatggcggaatcaatgccgatcaccgcaggtgagctactgacgatc
aacggcgttggtcaccgtaaactcgaacgcttcggcgcgcccttcatgaacgtgatccgc
gatcatgttgataatggtgattag
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