Pectobacterium cacticida: OI450_18445
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Entry
OI450_18445 CDS
T08693
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac00040
Pentose and glucuronate interconversions
pcac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OI450_18445
Enzymes [BR:
pcac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
OI450_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
UYX06834
LinkDB
All DBs
Position
complement(4058120..4060354)
Genome browser
AA seq
744 aa
AA seq
DB search
MKRCSSPTCPSLRKHRALRLAAVTLTNALLFSFSSHAATEPTPVWHGIAFGQSTDVNFSS
NVLPEKIGVNDVTINGKKLTPEDKADLSAPITIESRGGKIANTHDGLTFFYTKLPANVNF
TLQSDITVEQFGPENGAKPAAQEGAGILVRDIIGAPRQNPLKVGYEEFPAASNMVMNAIM
TQDKKSHTEVKLQAILRNGVIQPWGNAGAKITKTSYQENINLEKTPTFRLKMERTNDGFI
ASYAPKGTENWVSKEIKGADIVTRLDKDHYYVGFFASRNAKITVNNAQLTTTPAQTKASP
EFKAKALAPLLQVMSSSKTTGENYVVQAKANYNGTISVLQDGKPLGNAKQIKAGETFALP
TKIVGNTAEFKVVYQPTDGDDKTVKESTFKVDKAVYADAKNLYVSPQGSASNDGSKDAPL
DLASAIAALPADGTIWLNDGDYSATEIPVNASGQQKAVKNLFAVGNKAVIHGLQLKASYW
HVKGIEITEKPFRIEGSYNTIERVLAHHCDDTGIQVSSPANVGRPLWASHNLILNSESHS
NQDPGKINADGFAVKMRVGEGNRIHGAFSHNNIDDGFDLFNKIEDGANGVVVIENSIAMN
NTSNGFKLGGEGQPVAHQVKNSIAVGNKLDGFTDNFNPGALIVENNIALDNERFNFIFRP
SPYSGPEKQGVFKNNISLKTKAGKYDDAVVGNIDNSNYFIKNHRSVNAQGKEITANDFVS
VAIPETFTRDDKGNLILGDFLKKK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcttcaccaacatgtccgtctttacgaaaacaccgcgctttacgcctt
gcagccgtcacgttgacgaatgcattactctttagctttagttcgcacgccgcaacagaa
ccgacgcccgtctggcatggtatcgcctttggtcagtcaaccgacgtcaacttttcctcc
aatgttctgccggaaaaaattggcgttaatgacgtcaccattaatggtaagaaattaacg
ccggaagataaggccgatttgtccgcccctatcaccatagagagtcgtggcggaaagatt
gccaacacccatgatgggctgacgttcttctataccaagttacctgccaatgtgaatttt
acgcttcaatctgatattaccgtggaacagtttgggcctgagaatggcgccaaacccgca
gcgcaggaaggcgctggcattctggtgcgcgatattatcggtgcgccgcgtcaaaatccg
ttgaaagtagggtatgaagaatttcctgctgcctccaacatggtgatgaacgccattatg
acgcaggacaagaaatcgcataccgaagtgaagctacaggctattttgcgtaatggcgtg
atacagccgtggggcaatgccggagcaaaaatcactaaaaccagctaccaggaaaatatc
aatctggagaaaacgcccacgtttcgtctgaagatggagcgcactaacgacgggttcatt
gcctcatatgcaccgaaaggcacggagaattgggtatcgaaagagattaaaggtgccgat
attgttaccaggctggataaagaccactactacgtcggcttttttgcctctcgtaatgcc
aaaatcaccgtcaataacgcacaactaacgacgacgccagcccagactaaagcgtcaccg
gaatttaaggccaaagccttagcacctttgcttcaagtgatgtcctcatctaaaaccacg
ggtgaaaactatgtcgtgcaggctaaagccaattacaacggtacaatctcggtgctgcaa
gacggaaaaccactggggaacgccaagcaaattaaagcgggagaaactttcgctctgcca
acaaaaattgtcggtaacacggctgaatttaaggttgtctaccaaccaacagacggtgat
gacaaaacggtaaaagagagcacgttcaaagttgataaggccgtttatgccgacgctaaa
aacctgtacgtctcgccacaaggctccgccagcaatgacggcagtaaagatgcgccactc
gatcttgccagtgctatcgccgcgctgccagccgacggcacgatttggctcaacgatggt
gattacagcgcgaccgaaattcctgtcaacgccagcggtcaacagaaagccgtcaagaac
ctgtttgcagtcggtaataaagcggttattcacggcttacaactgaaagcaagttactgg
catgtgaaagggattgaaattacagagaaacccttccgcatcgagggaagctacaacact
atcgagcgtgttttggcacaccattgtgatgacaccggaattcaagttagttcgccagcc
aatgtaggtaggccgctgtgggctagccataacctaatcctgaattcagaatcgcacagt
aaccaagaccccggtaaaatcaacgccgatggttttgcggtaaaaatgcgggtaggtgaa
ggcaacaggatccacggcgcgttctcccacaacaacattgatgacggcttcgacctgttt
aacaaaattgaagacggtgccaacggcgttgtggtgatcgagaattctatcgccatgaac
aacaccagcaacggctttaaactggggggcgaaggtcaaccggtagcgcatcaggttaaa
aacagtattgcagtgggcaataaactcgatggtttcactgacaacttcaaccctggcgcc
ttgatcgttgaaaacaatatcgcgttagacaacgaacgctttaactttattttccgtcca
agcccttactctggcccggaaaaacaaggcgtcttcaagaacaatatttcgctaaaaacc
aaagcgggtaaatacgatgatgcggttgtcggcaatatcgataacagcaactatttcatc
aaaaatcaccgctcggttaacgcgcaaggtaaggagattaccgcgaatgatttcgtctca
gtcgccatccctgaaacgtttacgcgtgatgacaaaggtaatctgatacttggcgacttc
ctgaagaagaaataa
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