Physeter macrocephalus (sperm whale): 102973257
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Entry
102973257 CDS
T06011
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03015
mRNA surveillance pathway
pcad05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102973257 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
102973257 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102973257 (HBS1L)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102973257 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
102973257
NCBI-ProteinID:
XP_007106050
Ensembl:
ENSPCTG00005004840
UniProt:
A0A2Y9EQ41
LinkDB
All DBs
Position
10:28912924..28996132
Genome browser
AA seq
687 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVVEPVEEYDYE
DLKESSNSLLNHQLSGIDQARLFSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKMQNLKVKSEGAISTGKIAKGKSIDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTAEENGHIFHTPQKGHSSEDTSLVSSDVLETASKSALPSHAIQASEEQSSTPTPPVKK
SSKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVIILMDAPGHKDFIPNMIT
GAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSF
QPPRRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLVGMDVIKINVGCIFCGPKEPIKICTRFRARILIFNIEIPITKG
FPVLLHYQTVSEPAVVKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKG
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagttgttgaacctgtagaagaatatgattatgaa
gatttgaaagaatcctctaattctcttttgaaccatcagctaagcggaattgatcaagct
cgtcttttttcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaagtttgatgtgcaaaaggctttgtcagtggtt
ctggagcaagataaaatgcagaatttgaaggtcaagagtgagggagcaatatctacagga
aagatagcaaaaggaaaatcaatagattcccagtcatctcgaagtgaatctgaaattgtg
ccaaaagttgctaaaatgactgtatctggaaagaagcaaactatgggatttgaagtgcct
ggagtaactgctgaagaaaatggtcatattttccacacacctcaaaaaggacattctagt
gaagataccagccttgtttcttctgatgtacttgagaccgcttctaaatcagctcttcca
tcccacgccattcaagcatcagaagagcagagttcaacaccaacaccaccagtgaagaag
tctagcaagctgaggcaacaaatagatatcaaagcggagctggaaaagcggcaaggaggg
aagcaactcctcaacctagtggtcattggtcatgttgatgctgggaaaagtactctgatg
ggccatttgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaa
gagtctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggc
gaagaaagggaaaggggagtaacaatggatgttggtatgacaaagtttgagaccaaaacc
aaagttattatattaatggatgctccaggccataaggatttcattccaaatatgattaca
ggagcagcccaggcagatgtagctgttttagttgtagatgccagcaggggagagtttgaa
gctggatttgagacggggggacaaacacgagaacatggcctcttggttcgttctctggga
gtgacccagctcgcagttgcagtcaataaaatggatcaggttaattggcagcaagaaagg
tttcaagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagt
gatgtagcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcag
tcaagtgaacttacaaaatggtataaaggactatgtttattagaacaaattgattccttc
cagcctcctcgaagatctgttgacaagccatttagattatgtgtatctgatgttttcaaa
gatcaaggatctggattttgtgtaactggtaaaattgaagctggttatatccaaactggt
gaccgactactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcaccctgcat
gatgaacctgttgactgggcggcagcaggcgatcatgttagtcttacgttggttgggatg
gatgtcatcaaaatcaatgttggctgcatattttgtggacccaaagaacccattaagatt
tgcactcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaagga
tttcctgtgctgttacactaccaaaccgtcagtgaacctgccgttgttaaacgattgatt
agcgtcttaaacaaaagcactggtgaagtcacgaagaaaaagcctaaattgttgaccaaa
ggccagaatgcattggtggagctacagacacaaagaccagtggctcttgagctgtacaaa
gactttaaagagctggggagattcatgctgcgctacagtggttctaccatagctgctggt
gtagtcaccgagataaaaggctga
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