Physeter macrocephalus (sperm whale): 102973444
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Entry
102973444 CDS
T06011
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X2
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102973444 (RBBP6)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102973444 (RBBP6)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
U-box type E3
102973444 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
102973444
NCBI-ProteinID:
XP_007105699
Ensembl:
ENSPCTG00005007996
UniProt:
A0A2Y9EN15
LinkDB
All DBs
Position
14:64584010..64616717
Genome browser
AA seq
1763 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSSHPAPSISSLTSNQSSLAPPVPGNPSSAPAPVPDITATVSISV
HSEKSDGPFRDSDNKILPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVP
PPGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEESKSPYSGSS
YSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYH
RSRSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDMKAYYGR
SVDFRDPFEKERYREWERKYREWYEKYYKGYAAGAQPRPSANRENFSPERFLPLNIRNSP
FTRGRREEYSGGQSHRSRNIGGNYPEKLSSRDSHNQKDNTKSKEKESENAPGDGKGNKHK
KHRKRRKGEESEGFLNPELLETSRKSREPTSGEENKTDSLFVLPSRDDATPVRDEPMDAE
SITFKSVSEKDKREKDKPKAKGDKTKRKNDGSTVSKKETVAKPAKGPQEKLDGEREKSPR
SEPPLKKAKEETPKNDNVKSSSSSQKDEKIIGTPRKAHSKSVKEHQEAKPVKEEKVKKDY
SKDVKSEKLTSKEEKAKKPNEKSKPLDSKGEKRKRKTEEKCGDKDFESSSMKISKLEVTE
IMKPSPKRKMELDIEKLDRTPEKDKISSSTAPAKKIKLNRETGKKIGSTENISNTKEPSE
KLESTSGKVKQEKIKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVI
KTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTTQPISSVGKPASVIKNV
STKPSNAVKYTEKESESSEKIQKLTKEVSHEITQHEVKSSKNSASSEKGKTKDRDHSVLE
KENPEKRKNSTQPEKDSNLDRLNEQGNFKSLSQSSKETRTSGKEDKHDSIRGSSNKDFTP
NRDKKTDYDSREYSSSKRRDERNELTRRKDSPSRSKDSAAGQKTKPREERDLPKKGTGDS
KKSNSSPSRDKKPHDHKTTYDTKRSSEETKSVDKNPCKDREKYVLEAKNNKESSGNKSLY
VLNPPDPQIEKEQVTGQIDKNTIKPKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESN
VSVKEEETSGKISKELKDKVMEKAKESLDVAAVSQVGVIRSQSQSSPSVSPSRSHSPSGS
QTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKK
SKKSKDKEKEKEKDDQKVKSVTV
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacgaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccagtcaattacatgaagaaacctctaggtccaccacctccatcttatact
tgtttccgttgtggtaaacctggccattatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagttttatgatg
gaggtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatatgcaata
ccaactatagatgcagaagcatatgcaattgggaaaaaagaaaaaccaccttttttacca
gaggaaccatcatcatcttcagaagaagatgatcctatcccagatgaattgttgtgtctc
atctgcaaagatattatgactgatgctgttgtcattccgtgctgtggaaacagttattgt
gatgaatgtataaggacagctctcttggaatcagatgaacatacatgtccaacatgtcat
cagaatgatgtctctcctgatgctttaattgccaataagttcttacgacaggctgttaat
aacttcaaaaatgaaactggttatacgaaaagactaagaaaacagttgccgccaccccca
cccccaataccacctccaagaccactcattcagcggaacctacaacctctgatgagatct
ccaatatcaagacaacaagatcctctcatgattccagtgacatcttcatcaagtcacccg
gctccatctatatcttcattaacctctaatcagtcttccttggcccctcctgtgcctgga
aatccgtcttctgccccagcccctgtacctgatataactgcaacagtctccatatcagtc
cactcagaaaaatcagatggaccttttcgggattctgataataaaatactgccagctgca
gcgcttgcatctgaacattcgaagggagcctcttctattgcaattactgcccttatggaa
gagaagggttaccaggtgcctgtacttggaaccccatctttacttggacagtcattattg
catggacaattgatccccacaactggtccagtaagaataaacactgctcgtccaggtggt
ggtcgaccaggttgggaacattccaacaagcttggatatctggtttctccaccacagcaa
attagaagaggggagagaagctgctacagaagtataaaccgtggacgacaccacagcgaa
agatcacagagaactcaaggcccatcactaccagcaactccagtttttgtacctgtccca
ccccctcccttgtatcctcctcctccccatacacttcctctccctccaggtgttcctcct
ccacagttttctcctcagtttcctcccggccagccaccacctgctgggtatagtgttccc
cctccagggtttcctccagctccggccaatttatcaacaccttgggtgtcatcaggagta
cagacagctcattcaaataccatcccaacaacacaagcaccacctttgtccagggaagaa
ttctatagagagcaacgacgactaaaagaagagtccaaatctccctatagtggttcatcc
tattcaagaagttcatatacttactctaaatcaagatctggttcaacacgatcacgttct
tattctcgatcgtttagccgctcacattctcgttcctattcacgatcacctccatacccc
agaagaggcagaggaaagagtcgaaattaccgttcaaggtctagatcgcacgggtatcat
cgatctaggtcaaggtcacccccatatagacggtatcattcacgatcaagatctcctcaa
gcatttaggggacaatctcctaataaacgtaatgtacctcaaggagaaacagaacgtgaa
tattttaacaggtacagagaagttccaccaccatatgacatgaaagcttattacgggagg
agtgttgacttcagagacccatttgaaaaagaacgttaccgagaatgggagagaaaatat
agagagtggtatgaaaaatattataaaggctatgctgctggagcacagcctagaccatca
gcaaatagagagaacttttctccagagagatttttaccacttaatatcaggaattctccc
ttcacaagaggccgcagagaggagtactctggtggacagagtcatagaagtcgaaacata
ggtggcaactatccagaaaagctttcatcaagagacagtcacaatcagaaggataataca
aagtcaaaagagaaggagagtgaaaatgctccgggagatggtaaaggaaataaacataag
aaacacagaaaaagaagaaagggggaagaaagtgaaggctttttaaacccagagttatta
gaaacttctaggaaatcaagagagccaacaagtggtgaagaaaataaaacagactcattg
tttgttctcccaagtagagatgatgctacacctgttagagatgaaccaatggatgctgaa
tccattacttttaaatcagtgtctgaaaaagacaagagagaaaaagataaacctaaagca
aaaggtgacaagaccaaacggaaaaatgatggatcaactgtgtccaaaaaagaaactgtt
gcaaaacctgctaaaggacctcaagaaaaactagatggagagcgtgaaaaatctcctcga
tctgaacctccacttaaaaaagccaaagaggagactccaaagaatgacaatgtgaaatca
tcatcttcctctcaaaaagatgaaaagatcattggtacccccagaaaagctcactctaag
tcagtaaaggaacaccaggaggcaaaaccagtcaaagaggaaaaagtgaagaaggactac
tccaaagacgtcaagtcagagaagctaactagtaaggaagaaaaggccaagaaacctaat
gagaaaagtaaaccacttgatagcaagggagaaaaaaggaaaagaaaaactgaagagaaa
tgtggagataaagattttgagtcatcttcaatgaaaatctctaaattagaagtaactgaa
ataatgaaaccatcgccaaagcgcaaaatggaacttgatattgaaaagctggataggaca
cctgaaaaagacaaaatttcatcatcaactgctccagccaaaaaaatcaagcttaacaga
gaaactggaaaaaaaattggaagtacagaaaatatatctaatacgaaagaaccctctgaa
aaattggagtcaacgtctggcaaagttaaacaagaaaaaatcaaaggaaaggtcaggcga
aaagtgactggaactgaaggatccagctcaacacttgtggattataccagtaccagttcg
actggaggcagtcctgtgcggaaatctgaagaaaaaacagatacaaagcgaactgtcatt
aaaacaatggaagaatataataatgataacacagctcctgctgaagatgttattattatg
attcaggttcctcaatccaaatgggataaagatgactttgaatctgaagaagaagatgtt
aaatccaccacacagcctatatcaagtgtaggaaaacctgccagtgttataaaaaatgtt
agcactaaaccatcaaatgcagtcaaatatactgaaaaagaaagtgagtcatcagagaaa
attcagaaactcaccaaggaagtgagccatgaaattacacagcatgaggtcaaaagttca
aaaaactctgcatctagtgaaaaagggaaaaccaaagatcgagatcattcagtgttggaa
aaggaaaacccagaaaagaggaagaacagcactcagccagagaaagatagtaatctggac
cgtctgaatgagcaaggaaattttaaaagtctgtctcaatcttccaaagagactagaact
tctggcaaagaagataagcatgattccattcgaggttcctcaaataaagacttcactccc
aacagagacaaaaaaactgattatgacagcagagagtattcaagttccaaacgtagagat
gaaaggaatgaattaacaagaagaaaagactccccttctcgcagtaaagactctgcagct
ggacaaaaaactaagccaagggaggagagagatttgcctaaaaaaggaacaggagattcc
aaaaaaagtaactctagtccctcaagagacaaaaaacctcatgatcataaaaccacttat
gatactaaacgttcaagtgaagagacgaaatctgtagataaaaatccctgtaaagatcgt
gagaaatatgtattagaggcaaagaacaataaagagtcaagtggcaataaatcactttat
gtacttaacccaccggacccacagattgagaaagagcaagttactgggcaaattgataag
aacaccatcaagcctaaaccccagttaagtcattcctctcgactgtcctctgacttaact
agagaaactgatgaagctgcttttgaaccagattataatgaaagtgacagtgagagcaat
gtatctgtaaaagaggaagaaacttcaggaaaaatttctaaggaactgaaagataaagta
atggagaaagcaaaagagagcctggacgtagcagcagtcagccaggtaggtgtaatcagg
agccagagtcaaagcagccctagtgtcagtccaagtagaagtcatagcccttctggaagc
caaacccgaagccacagtagcagtgctagctctgcagaaagtcaggacagcaagaagaag
aagaaaaagaaggaaaagaaaaagcacaagaaacataaaaaacataagaagcataagaag
catgcaggcactgaagtagaattggaaaaaagccaaaaacacaaacataagaaaaagaag
tcaaagaagagcaaagataaagaaaaggagaaggagaaggatgaccaaaaagtgaaatct
gtcactgtgtaa
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integrated database retrieval system
