Physeter macrocephalus (sperm whale): 102973754
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Entry
102973754 CDS
T06011
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03082
ATP-dependent chromatin remodeling
pcad04714
Thermogenesis
pcad05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102973754 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102973754 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102973754 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102973754 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102973754 (SMARCA2)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102973754 (SMARCA2)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102973754 (SMARCA2)
Chromatin remodeling factors
BAF complex
102973754 (SMARCA2)
PBAF complex
102973754 (SMARCA2)
GBAF(ncBAF) complex
102973754 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102973754
NCBI-ProteinID:
XP_028349708
UniProt:
A0A455BLT4
LinkDB
All DBs
Position
9:45186636..45339841
Genome browser
AA seq
1368 aa
AA seq
DB search
MLLCRRPLLVPIAGLPGGSGQAGYGHGVPFLPSCPCRSCPAGPGPELSGPSPPQKLPVPA
PSGRPSPAPPAAAPPPAAAVPGPSVPQPTPGQPSPILQLQQKQSRISPVQKPQGLDPVEI
LQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRR
DTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDF
KEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKK
DRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRKRKKAEENAEGEESALGPDGE
PIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDY
EEEDEEEEASRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYY
TVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGK
FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGA
KTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKL
RATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIF
LLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQM
IARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEK
IFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVE
KAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQ
LSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFN
LEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEEEDESESEAKSVKVKIKLN
KKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDENEQSEASGTDDE
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgtgcagaagacctttacttgtccccatcgccgggctcccagggggcagcggg
caggccgggtatgggcatggggtgcctttcctcccgagctgcccgtgtcgctcttgtccc
gcaggcccggggccggagctgagcggcccgagccccccgcagaagctgccggtgcccgcg
cccagcggccggccctcgcccgcgccccctgcagcagcgccaccgcccgcggccgccgtg
cccgggccctcggtgccgcagccgaccccggggcagccctcgcccatcctgcagctgcag
cagaagcagagccggatcagccccgtccagaaaccgcagggcctggaccccgtggagatt
ctgcaggagcgggagtacagacttcaggctcgcatagcccataggatacaggaactggaa
aatctccctggctctttgccaccagatttacgaaccaaagcaaccgtggaactgaaagca
cttcggttactcaatttccagcgtcagctgagacaggaggtagtggcctgcatgcgacgg
gacacgaccctggagacggccctcaactccaaagcatacaaacggagcaagcgccagacc
ctgagggaagcccgcatgacggagaagctggagaagcagcagaaaatcgagcaggagagg
aagcgtcggcagaagcaccaggaatacctgaacagtattttgcaacatgcaaaagatttt
aaggagtaccatcggtccgtggccgggaagatccagaagctttccaaagcagtggccact
tggcacgccaacaccgaaagggaacagaagaaggagaccgagcggatcgaaaaggagaga
atgcggagattgatggctgaagatgaagagggctatagaaaactgatcgatcaaaagaaa
gataggcgtttagcgtaccttttgcagcagaccgatgagtatgtggccaacctgactaat
ctggtttgggagcataagcaagcccaggcggccaaagagaagaagaagaggaggaggaag
aggaagaaggctgaagagaatgcggagggggaggagtctgccctgggaccagatggagag
cccatagatgagagcagccagatgagtgacctccctgtcaaagtgactcacacagaaacc
ggcaaggtcctgtttggcccagaagcacccaaagccagtcagctggacgcctggttggaa
atgaatcctggttacgaagttgccccgagatcggacagtgaagagagtgattctgattat
gaggaggaggatgaagaggaagaggccagtaggcaggaaactgaagagaaaatacttctg
gatccaaacagcgaagaggtttccgagaaggacgctaagcagatcatcgagacagctaag
caagacgtggatgatgagtacagcatgcagtacagtgccaggggctcccagtcctactac
acagtggcccacgccatctcagagagggtggagaagcagtcggccctcctcatcaatggg
accctgaagcattatcagctccagggcctggaatggatggtttctctgtataataacaat
ttgaacggaatcttagctgatgaaatggggctgggaaagaccatacagaccattgcactc
atcacttatctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctt
tcgactctatctaactggacgtatgaatttgacaaatgggctccttccgtggtgaaaatt
tcttacaagggcacccctgccatgcgtcgttccctcgtcccccagttacggagtggcaaa
ttcaatgtcctcctgactacttatgagtacattataaaagacaagcacattcttgcaaag
attcggtggaaatatatgatagtggacgaaggccaccgaatgaagaatcaccactgcaag
ctgactcaggtcctgaacactcactacgtggcccccagaaggatcctcttgaccgggacc
cccctgcagaataagctcccggaactctgggcgctcctcaacttcctccttcccacaatt
tttaagagctgcagcacgtttgagcagtggtttaatgctccatttgccatgactggagaa
agggtggacttaaatgaagaagaaactatattgatcatcaggcgtctgcataaggtgttg
agaccgtttttactgaggagactgaagaaagaagttgaatcccagcttccagaaaaagtt
gagtatgtgatcaagtgtgacatgtcagctctgcagaagattctgtatcgccatatgcaa
gccaaagggatcctcctcacagacggttcggagaaagataagaaggggaaaggaggcgct
aagacacttatgaacactatcatgcagttgagaaaaatctgcaatcacccatatatgttt
cagcacattgaggaatcctttgctgaacacctgggctattcaaatggggtcatcaatggg
gctgagctgtatcgggcctcaggaaagtttgagctacttgatcgtattctgccaaaattg
agagcgactaatcaccgcgtgctgcttttctgccagatgacgtctctcatgaccatcatg
gaggattactttgcttttcggaacttcctttacctgcgccttgatggcaccaccaagtct
gaagatcgtgctgctttgctgaagaaattcaacgaacctgggtcccagtatttcattttc
ttgctgagcacaagagctggaggcctgggcttaaatctccaggcagctgataccgtggtc
atctttgacagcgactggaatcctcatcaggacctgcaagcacaagaccgtgctcaccgc
atcggccagcaaaacgaggtccgtgtgctaaggctctgcaccgtgaacagtgtggaggaa
aagatcctcgcagccgcaaagtacaagctgaatgtggatcagaaagtgatccaggcaggc
atgtttgatcagaagtcttcaagccacgagcggagggcattcctgcaagccatactggag
cacgaagaggaaaatgaggaagaagatgaagtacccgacgatgagactctgaaccaaatg
atcgctcgacgagaggaggagtttgatctttttatgcgcatggacatggaccggcgaagg
gaggatgcccggaacccaaaacgcaagccccgcttgatggaggaagatgagctgccctcc
tggattattaaagatgacgccgaggtggagcggctgacgtgtgaagaagaggaggagaag
atcttcgggagggggtctcgccagcgccgggacgtggactacagcgacgccctcacagag
aagcagtggctgagggccattgaagacggcaatttggaagaaatggaagaggaagtacgg
cttaagaaacgaaaaagacgaagaaatgtggataaagatcctgcaaaagaagatgtggaa
aaggccaagaagaggagaggtcgccctccagctgagaaactgtcaccaaatccccctaaa
ctgacaaagcagatgaacgctatcattgatactgtgataaactacaaagacaggtgtaac
gtggagaaggtgcccagtaactctcagttggaaatagaaggaaacagttcagggcgacag
ctcagtgaagtcttcattcagttaccttcaagaaaagaattaccagaatactatgaatta
attaggaaaccggtggatttcaaaaaaataaaggaaagaattcgtaatcataagtaccga
agcctgggtgacctggagaaagacgtcatgcttctgtgtcacaatgctcagacgttcaac
ttggagggatcccagatctacgaagactccatcgtcttacagtcagtgttcaagagtgct
cggcagaaaattgccaaagaagaagagagtgaggacgagagcaacgaagaggaggaagag
gaagaggaagacgagtcagagtcagaggcaaaatctgttaaggtgaaaatcaagctcaac
aaaaaagatgagaaaggccgagacaaaggaaaaggcaagaaaaggccaaatcgaggaaaa
gccaaacctgtggtgagcgattttgacagtgatgaagagcaggatgaaaatgaacagtca
gaagcaagcgggactgatgatgagtga
DBGET
integrated database retrieval system
