Physeter macrocephalus (sperm whale): 102973772
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Entry
102973772 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03008
Ribosome biogenesis in eukaryotes
pcad03013
Nucleocytoplasmic transport
pcad03015
mRNA surveillance pathway
pcad05014
Amyotrophic lateral sclerosis
pcad05164
Influenza A
pcad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102973772
03015 mRNA surveillance pathway
102973772
03008 Ribosome biogenesis in eukaryotes
102973772
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102973772
05168 Herpes simplex virus 1 infection
102973772
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102973772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102973772
03009 Ribosome biogenesis [BR:
pcad03009
]
102973772
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102973772
mRNA cycle factors
Stress granule specific factors
102973772
Ribosome biogenesis [BR:
pcad03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102973772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
NTF2
Motif
Other DBs
NCBI-GeneID:
102973772
NCBI-ProteinID:
XP_054937569
UniProt:
A0A9W2WEE8
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All DBs
Position
21:78664120..78715278
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AA seq
649 aa
AA seq
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MATVTTFLLRQTWPDEKSRSCLQVFGTQLRVWVPGGGWTTLGCGETKGSTTKSPLSRFGA
QCLRSLVGKAIGVPPGPTFDLTVYLCGNIDQVNTLQRKARFWGIYQRRHNYWSQQATSQK
QQDRESLRSDAHVDIQARYAPYAIPFCHRRGNFQKQDKTHVNKETEQKPPERKMERNRQD
ETLGSWFKIRIPFGIKYDEKWLLNLIQKQCSVPFTPVEFHYEKMQAQFFIENANIAFALK
NVNDVIYNEANERISIFVEPCDAPHSVLKELKSEKLEQIKLPVKERYDASQQSLDIQRVR
SDPDLMTRDTGMAXNPRNGMASSLQIHPGNMPKLLSLDLSNKKPYQLHGLSNTMPNASNT
ENLNLSNTEVKSAGEMDKGERLEPEGMCADRNPLCTTFPDKSTNISSILELFPKLLTLDG
QETSPLAKCGIEASKHLPTCKGNYFGSDELKSLVLQFLQQYYFIYDYGDRQGLAGAYHEE
ACFSLTIPFHPEDPAPSSLCEHFKDSRNMKKLKDPHLRVQLLKHTKRVIVHTLCVLPKTQ
HNFSSFVVDTWFQTETMLCFSVSGVFKEVEGSSQGCVRAFTRTFIATPASYSSLCIVNDE
LFVRDASPSETQSVFSIPVPTPTSSSMHTLSQHQQDIMQASSTPPQMNL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgacgacttttctactgaggcagacgtggcctgacgagaagagtcggtca
tgccttcaggtgtttgggactcagctgagggtgtgggtccccggtgggggctggaccacg
ctggggtgtggggagacaaagggatccacaaccaagtcacctctttcccgctttggagct
cagtgcctccgctctctcgtaggtaaagccattggggtccctcctggccccacttttgac
ttgacagtttatctgtgtggaaacattgatcaagtgaacactttacaaagaaaagcaaga
ttctggggtatttaccaaaggagacacaactattggtctcaacaggccacttcccagaag
cagcaagatagagaatcactaagaagtgatgctcacgtggacatccaagcaagatatgct
ccctatgccattccattctgccatcggagaggcaattttcagaaacaagacaaaacccat
gttaacaaggagacagagcaaaagcctccagagagaaaaatggagagaaacaggcaggat
gagactttggggagctggttcaagatcagaattcccttcggtattaaatatgatgagaag
tggctgctgaatttgattcagaagcaatgcagtgtccccttcaccccagtcgaatttcac
tatgagaaaatgcaggcccagttcttcattgagaatgccaacattgccttcgcactgaag
aatgtcaacgacgtgatttacaatgaggctaatgaaaggatatctatctttgttgagccc
tgtgatgcaccccactctgtgctgaaggagctgaagtcagaaaagttggagcagataaag
ctgcccgtgaaggaacgatatgatgcctcccagcaatctcttgacatccagagagtccgc
tctgaccctgacttgatgacccgtgatactggaatggcgtgaaaccctagaaatggcatg
gcctcctccctgcagatccatccagggaatatgcccaagcttttgtccttggacctgagc
aataagaaaccctaccagctgcatggcctgtccaacactatgccaaatgcttccaacacc
gagaacttgaacctctccaacactgaggtgaagtctgcaggggagatggacaagggtgag
cggctggagccagaagggatgtgtgcagacagaaaccccctgtgcaccaccttccctgat
aagtcaaccaacataagctccatcctggaattgttccccaagttactaaccttggatggc
caggagacatccccactggctaagtgtggtattgaagccagcaagcacttaccaacctgc
aagggaaactactttggatctgatgagctgaagagcctagtcctgcaattcctgcagcag
tactacttcatctatgactatggagaccgacagggtctcgcgggtgcttatcacgaggag
gcctgcttctccctgaccattcccttccaccccgaggacccagccccaagcagcttgtgc
gagcacttcaaggacagcaggaatatgaagaagctcaaggacccccacctgcgggtccag
ctgctgaagcacacaaaacgtgtcattgtgcacaccctctgtgtgttgcccaagactcag
cataacttcagctccttcgtggtggacacgtggtttcagacggaaacgatgctctgcttc
tccgtcagtggggtgttcaaggaagtggaaggaagttctcagggctgtgtgcgtgccttc
acccggaccttcattgctacccctgccagctattccagtctgtgcatcgtgaatgacgag
ctctttgtgagggatgccagccccagtgagacccagagtgtgttctccataccagtgcct
acacccacctccagctccatgcacaccctctcccagcatcagcaggacatcatgcaggca
tcctccaccccacctcagatgaacctctag
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