Physeter macrocephalus (sperm whale): 102973908
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Entry
102973908 CDS
T06011
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X2
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102973908 (GEN1)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102973908 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
SpoU_methylas_C
Motif
Other DBs
NCBI-GeneID:
102973908
NCBI-ProteinID:
XP_007127399
Ensembl:
ENSPCTG00005015707
UniProt:
A0A2Y9FQ46
LinkDB
All DBs
Position
12:38161129..38191922
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AA seq
908 aa
AA seq
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MGVNDLWQILEPVKQHVHLHSLGGKTVAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SYLTLMDVKLVFVMEGEPPKLKADVISKRNQIRYGPSGKTWSQKTGRSHFKSVLKECLDM
LECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTMSSIKSKLGLDRNALVGLAILLGCDYLPKGVPGVGKEQALKLIKILKGQSLLQRFNQ
WNEKFCYSNSQPAVVSKLAHCSVCSHPGSPKDHERNGCKLCKTDRYCEPHDYEYCCPCEW
HRTEHERQLNAVENSIKKKACSCEGFPFHEVIQEFLLNKDKLVMAIRYQRPDLLLFQRFT
LEKMDWPSHYACEKLLILLTHYDMRERKLGRRNSNQLQPLRIVKNRIRNGVHCFEIEWEK
PEHYAIEDKPGELVLQTIEEESLFEAAYPEIVAVYQKQKSEIKGKKQKSMKTKSKGNNLP
ESDDMMTFQSHMTLKPTCEIFSKQNSKLNLEISPDSTLPQESTSVSLNTLLLPEDAPCLN
TQEQLISSPRPLAVQQIKAISKSLIADSSQPSTSSHNISAIADLHLSTIDWEGTSFSNSS
AIPGNTFAHGVKSELETAIPDSFKNITEQLSCESELCTTNINKLFDWDLQKTDPEEHLLS
GITDLHLQDLPLKERIHIKSSYSQNNVQPDDDLKTLSLLTVQEHCIANSSSECLSHLSKD
LLGIHLQNESRNCKVLKGNQLFQENYKANTSIPYSVNNPTVKTSNVRTGPPNTALDYSRK
VDVQTTRKTVMKKSVCLDKHSSGEEIIPESGKAKSTTQKMKQNSQKHSPAQFRKNDANKL
SNPKAHIKETEQYVQPYKTAGNEETCFQDAAKGSLSFLQCRKEKDISGTCLDSPLPLSQR
LKLRFQNT
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgacttgtggcagattctggagcctgttaaacaacacgtccacttgcac
agtcttggtgggaaaaccgttgcggttgatctgagtctctgggtatgtgaagcacagaca
gtcaaaaaaatgattgggacagtcatgaagccccacctcaggaacctattttttcgtatc
tcatatttaacgctaatggatgtaaaactggtgttcgttatggaaggggaacccccaaag
ctgaaagctgatgtcataagtaagaggaatcagattcggtatggaccttcgggaaaaaca
tggtctcagaaaacagggagatcacattttaaatcagtcttaaaggagtgtcttgatatg
ctggaatgcttaggaattccctgggtccaagctgctggggaagctgaagccatgtgtgct
tacctcaatgccagtggttatgtagatggctgcctcaccaatgatggagatgctttcctt
tatggggcccaaactgtttatagaaatttcactatgaataccaaggacccacatgttgac
tgttatacaatgtcatccatcaagagtaaactaggtttggatagaaatgctctggttggg
ctagcaatactacttggctgtgattatcttccaaagggagtccctggagttggaaaagag
caagcgctaaaacttataaagattttgaaagggcaaagtttacttcagaggtttaatcag
tggaatgaaaaattttgttactctaattcacaaccagcagttgttagcaaactggctcat
tgctctgtatgttcccatccaggttcccctaaggatcatgaacgtaatggatgcaaatta
tgtaaaactgatcgatattgtgagccacatgattatgaatactgttgtccttgtgagtgg
caccgaacagaacatgagagacaactaaatgcagtagaaaacagtattaagaaaaaagct
tgcagttgtgagggattcccattccatgaggttattcaagaattccttttgaacaaggat
aaattggtgatggcaatcaggtaccaaagacctgatttattattgtttcagagatttact
cttgaaaaaatggactggcccagtcactatgcatgtgagaaattgttgatactgttgacc
cactatgacatgagagaaagaaagctcggtagaaggaactctaatcaactacagccactt
cgaattgttaaaaaccgaatcagaaatggagttcattgctttgaaatagaatgggaaaag
cctgaacattatgctatagaagataaacctggagaattggttttacaaacaatagaagaa
gaatcattgtttgaagcagcttatcctgagattgttgctgtttaccaaaaacaaaagtca
gaaattaaaggcaagaaacaaaaaagcatgaaaactaagtctaaaggaaacaatttgcca
gaatcagatgatatgatgacttttcaatcacacatgactttaaaacccacatgtgaaatc
ttttctaagcagaattccaagttaaatttggaaatttcccctgattctacattaccccag
gaatctacttctgtgtcattgaataccttgcttttacctgaagatgctccctgtttgaat
acacaagaacagttaatatcttctccaagacctttggctgtgcagcaaattaaagctatc
agtaagtctctgattgcagactctagtcaacccagtacctcatcccataatatatctgca
attgctgatctgcacttgagcaccattgactgggaaggtacttcttttagtaattcttca
gctatcccagggaacacttttgctcatggtgtaaaatcggaacttgaaacagctatccct
gatagctttaaaaatattacagagcaattgtcatgtgaatcagaattgtgcactacaaac
attaataaactgttcgattgggatcttcaaaagactgatcctgaagagcacctactttct
ggcattactgatttacatcttcaggatttacctttaaaggaacgaatacatataaaatca
tcatattctcagaataatgtacaaccagatgatgatctgaaaacattgtccctacttact
gtacaagaacactgtattgctaatagtagttctgaatgtctatcacatctttcaaaagat
cttctaggaattcatttgcaaaatgaatctagaaactgtaaagtcctaaaaggaaaccag
ctgtttcaagaaaactataaagcaaatacttctataccttattctgtcaataacccaaca
gtaaagacctccaatgttagaactggaccaccaaatactgctttagattatagtagaaaa
gttgatgtgcaaaccactcggaaaactgtaatgaagaagagtgtttgccttgacaaacat
tcctctggtgaagaaattattccagagtctgggaaagctaagtccacaactcaaaaaatg
aagcagaattctcagaaacatagcccagcccagttcagaaaaaatgatgccaacaaattg
agtaaccctaaagcacatattaaagaaactgaacagtatgtccagccttataaaacagct
ggaaatgaagaaacctgtttccaagatgcagcaaaagggtctctgagttttctacagtgt
cgtaaggaaaaagacatctctggtacctgtttggatagtcctcttcctttaagtcagaga
ttaaaactaaggttccaaaacacctga
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