Physeter macrocephalus (sperm whale): 102974206
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Entry
102974206 CDS
T06011
Symbol
HNRNPA1L3
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like 3
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
pcad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102974206 (HNRNPA1L3)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102974206 (HNRNPA1L3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102974206 (HNRNPA1L3)
03041 Spliceosome [BR:
pcad03041
]
102974206 (HNRNPA1L3)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102974206 (HNRNPA1L3)
mRNA cycle factors
Common to processing body (P body) and stress granule
102974206 (HNRNPA1L3)
Spliceosome [BR:
pcad03041
]
Common components
Common spliceosomal components
hnRNP proteins
102974206 (HNRNPA1L3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
DUF4715
Motif
Other DBs
NCBI-GeneID:
102974206
NCBI-ProteinID:
XP_054934915
UniProt:
A0A9W2W7N5
LinkDB
All DBs
Position
17:25787399..25789216
Genome browser
AA seq
365 aa
AA seq
DB search
MSPPSTAVMSKSESPKEPEQLRKLFIGGLSFETTDDSLRSHSGQWGTLTDCVEMRDPNTR
RSRGFGFVTYATVEEVGAAMKARPHEVDGRVVEPKRAVSREDSQRPGVHLTVKKIFVGGI
KEDTEEHHLRDYFEQYGKIEVIEVMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNG
HNCEVRKALSQQEMASASSSQRGRSGSGNFGGGRGGXFGGNDNFGHGGNFSGRAGFGGSC
GGGGYGGSGDGYNGFGNDGSNFGGGGSYDDFGSYNNQSSNIGPMKGGNFGGRSSGPYGGG
GQYFAKPRNQGSYGGSSSSSGYGSGRVLITARKQSLAGEESQRSDGEATGYNRFVNSAKH
SGGRA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccccctccactgccgtcatgtctaagtcagagtcacccaaagagcccgaacag
ctgcggaagctcttcatcggaggtttgagctttgaaacaaccgatgacagtctgaggagc
cattctgggcagtggggaacgctcacagactgtgtggaaatgagggatccaaacaccagg
cgctccagaggcttcgggtttgtcacgtatgccactgtggaggaggtgggtgcagccatg
aaggcaaggccacacgaggtggatggaagagttgtggaaccaaagagggccgtctcaaga
gaagattctcaaagacctggtgtccacttaactgtgaaaaagatttttgttggtggcatt
aaagaagacactgaagaacatcacctaagagattattttgaacagtacgggaaaattgaa
gtgattgaagtcatgactgaccgaggcagcggcaaaaagagaggctttgctttcgtaacc
tttgatgaccatgactccgtagacaagactgtcattcagaaataccacactgtgaatggc
cacaactgtgaagtaaggaaagccctatctcagcaagagatggctagtgcctcatccagc
caaagaggtcgaagtggttctggaaactttggtggtggtcgtggaggtngatttggtggg
aatgacaactttggtcatggaggaaacttcagtggtcgagctggctttggtggcagctgc
ggtggcggtggctatggtggcagtggggatggctataatggatttggtaacgatggaagc
aattttggaggtggtggaagctacgatgattttggcagttacaacaatcaatcttcaaat
attgggcccatgaaaggaggaaactttggaggcagaagttctggcccctatggtggtgga
ggccaatactttgccaaaccccgaaaccaaggtagctatggtggttccagcagcagcagt
ggctatggcagcggcagagttttgattactgccaggaaacaaagcttagcaggagaggag
agccagagaagtgacggggaagctacaggttacaacagatttgtgaactcagccaagcac
agtggtggcagggcctag
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