Physeter macrocephalus (sperm whale): 102974238
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Entry
102974238 CDS
T06011
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102974238 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcad01009
]
102974238 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcad04515
]
102974238 (PCDH11X)
Protein phosphatases and associated proteins [BR:
pcad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102974238 (PCDH11X)
Cell adhesion molecules [BR:
pcad04515
]
Cadherins
Protocadherins
102974238 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
LYRIC
DUF6377
Adeno_E3_CR2
Drf_FH1
Motif
Other DBs
NCBI-GeneID:
102974238
NCBI-ProteinID:
XP_054937801
Ensembl:
ENSPCTG00005019408
UniProt:
A0A9W2WEW4
LinkDB
All DBs
Position
21:68204691..68932747
Genome browser
AA seq
1343 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGVLVDTRCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDIGINGVQNYQLIK
GQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGENARIHFHFSNLVSNMAKRLF
HLNSTTGLITIKEPLDREESPNHRLLVLASDGGLIPARAMVLVNVTDVNDNVPSIDIRYI
INPINGTVVLSENAPLNTKIALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNTPVFTQPFISLSVPENNS
PGTQLTKISATDADTGHNAEINYLLGIDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTV
LAKDNGTPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSILDANDDFTIDPQTGVIRPNISFDREKKESYTFYVKAEDGGRVSRSSTAKVT
INVVDVNDNKPVFVVPSSNYSFELVLPSTNPGTVVFTVVAIDNDTGMNAELHYSIVGGNT
KGLFMIDQTTGNITLKEKCVLADLGLHKLVVKAKDLGQPDSLFNVVNVNLFVNESVTNAT
LIYELVRKNIETPVTQNIETADTSSPSSDYVKIVVAIVAGTITVILVIFITAVVRCRQSP
HLKAAQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKKHTPKNLLLNFVTIEETKEDDADN
DGNSVTLDLPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNS
KHHIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRPPMKEVIR
SRTPMKETTTVEIWTHPQPQRKSEGKKAGKSQRHVTFHLPEGSQESSSDGGLGDHDTGSL
PSTSHALPLGYPQEEYFDHAAPNNRTEGDGNSDPESTAEITVQPTVEEASDNCTQECLIL
GHSDACWMPASLNHSSPLQAQTSALNHSPPLTQTTLRRRNPPVTQTVVLCHSPPVTQAIA
LCHSPPPAQTSTLHHSPPLAQATALRHSPPPAQASALRYSPPLAQAAAIHWSPPLPQAAA
LHRSPAQPPMGLQQGWGQGAGPDGLLSLDQRAQGSTRSQFYAKSERLHPSDDSIKVIPLT
TFTPGQQTRPSRGDSPIMEEHPL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcgtcgtgtttcag
tctggcgcccaggagaagaactacaccatccgggaagaaatgccagaaaacgtcctgata
ggcgacttgctgaaagacctcaacttgtcgctaattccagacaagtccttaacaactcct
atgcagttcaagttagtgtacaagaccggagatgtgccactgattcgaattgaagagggt
actggtgagatcttcactactggagctcgcattgatcgtgagaaattatgtgctggtgtc
ttagtggacacccgttgcttttatgaggtggaggttgccgttctgccagatgaaatattt
agactggttaaaatacgttttctaatagaagacataaatgataatgcaccattattccct
gcaacggttatcaacatatcaattccagagaactcagctataaactctcgatatgctctc
ccagcagccattgatcctgacataggaataaacggagttcaaaactaccaactaattaag
ggtcaaagtatttttgggcttgatgttattgaaacaccagaaggagagaagatgccacaa
ttgatagttcaaaaagagttagatagggaagaaaaagatacatatgtaatgaaagtaaag
gttgaagatggtggctttcctcaaagatccagtactgccattttgcaagtgagtgttgct
gatacaaacgataaccgcccagtcttcaaggagaatgagattgaagtcagtataccagaa
aatgctcctgtaggtacttcagtgacacaacttcatgccacagatgcggacataggtgaa
aatgccaggattcacttccatttcagcaatctagtctccaacatggccaagaggctattt
cacctcaactccaccactggacttatcacaatcaaagaaccactggatagagaggaatca
ccaaaccacaggttactggttttggcaagtgatggtggattgataccagcaagagcaatg
gtgctagtaaatgttacagatgtcaatgataatgtcccatcaattgacataagatatatc
atcaatccaatcaatggcactgtggttctttcagaaaatgctccgctcaacaccaaaatt
gctctcataactgtgacagataaggatgctgaccataatggtagggtgacgtgctttaca
gatcatgaagtccctttcaggttgaggccagtattcagtaatcagttcctcctagagact
gctgcatatcttgactacgagtccacaagagaatatgccattaaattactggctgcagat
gctggcaaacctcctttgaatcaatcatctatgctcctcatcaaagtaaaagatgaaaat
gacaacactccagttttcacgcagcctttcataagtctttctgttcctgagaataattct
cctggcacccagttgacaaaaataagtgcaacggatgcagacacagggcataatgctgag
ataaactacctgcttggcattgatgctccatctgaattcaacctggatcatcgtacaggc
attctgactgcagtgaagaaactggatagagaaaaacaggaaaaatattcattcacagtt
ctggcaaaagataatgggacaccacctttaataaccaatgccacagtcttagtgactgtt
cttgatcagaatgacaacagtccaattttcactcacaatgagtacaacttctatgtccca
gaaaaccttccaagacatggcacagtaggactaatcactgtaactgatcctgattatgga
gaaaattctgcagtcactctctccattttagacgcaaatgatgacttcaccattgatcca
cagactggtgtcatccgaccgaatatttcctttgatagggaaaaaaaagaatcttatact
ttctatgtaaaggctgaggatggtggtagggtatcacgttcttcaactgccaaagtcacc
ataaatgtggttgatgtcaacgacaacaaaccagtttttgttgtcccttcttcaaactac
tcctttgaattggttctgccatccactaatccaggcacagtggtcttcacggtagttgct
attgacaacgacactggcatgaatgcagagcttcattacagcattgtaggaggaaacaca
aaaggtctgtttatgattgaccaaacaacaggcaacattacactgaaggagaaatgtgtc
cttgcagaccttggtttacacaaactggtagtcaaagctaaggacttaggacaacctgat
tctctcttcaatgttgtaaatgttaatctatttgtgaatgagtcagtgaccaatgctaca
ctgatttatgaattggtgcgcaaaaacattgaaacaccagtgacccaaaatattgagaca
gctgatacatcctcaccatccagtgactatgtcaagatcgtggttgctattgttgcaggc
accataactgtcatccttgttattttcatcactgctgtagtaagatgccgccaatcacca
caccttaaggctgctcagaaaaacaagcagaattccgaatgggttactccaaacccagaa
aacaggcagatgataatgatgaagaagaagaagaagaagaagaaaaagaagcatactccc
aagaacttgctgcttaactttgttaccattgaagaaactaaggaagatgatgctgacaat
gatggaaacagcgtcacgctagaccttcccattgaattggaagagcaaaccatgggcaag
tacaactggggcactacacctactactttcaagcctgacagccctgatttggcccggcac
tacaaatctgcctctccacagcctgccttccagatccagccggaaactcccctgaattcg
aagcaccacatcatccaggaactgcctcttgataacaccttcgtgggctgtgattccatc
tccaagtgttcctccagcagttctgatccctacagcgtttctgagtgcagctatccagtg
acaactttcaagacccctgtgtctgtacataccagaccgccaatgaaggaggttatacga
tctcgcacacccatgaaagagacaactactgtggagatctggactcatccccaaccacag
cggaaatccgagggaaaaaaggcaggaaagtcccagcggcatgtcacatttcacctacca
gaaggatctcaggaaagcagcagtgatggtggactaggagaccatgatacaggcagcctt
cccagcacatcccatgccctgccccttggctatcctcaggaggagtactttgatcatgct
gcacccaacaaccgcactgaaggggatggcaactctgatcctgaatccactgcagaaata
actgttcaaccaaccgtggaagaggcctctgacaactgcactcaagaatgtctcatcttg
ggccactctgatgcctgctggatgccagcttctctgaaccattccagccctttacaggca
cagacctctgctctgaaccacagcccgcccctgacgcagaccactcttcgccggcgcaac
cctccagtgacacagaccgttgtgctctgccacagtccacctgtgacccaggctattgca
ctgtgccacagccctccaccagcacagacctccactctgcaccacagcccacctctagca
caggctactgctcttcgccacagccctccaccagcacaggcctctgccctccgctacagc
cctcccctggcacaggctgctgcaatccactggagccctcctctgccacaggctgctgcc
ctccatcgcagccccgcacaaccaccaatgggtctgcagcaaggttgggggcaaggtgct
ggccctgatggactactttctcttgatcagagagcacaaggtagtacaagatctcagttt
tacgccaagtctgaaagacttcatcctagtgatgattcaattaaagtcattcccttgaca
accttcactccaggccagcagaccagaccctctaggggtgattctcccattatggaagaa
catcctttataa
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