Physeter catodon (sperm whale): 102974293
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Entry
102974293 CDS
T06011
Symbol
CSF1
Name
(RefSeq) macrophage colony-stimulating factor 1 isoform X5
KO
K05453
macrophage colony-stimulating factor 1
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04010
MAPK signaling pathway
pcad04014
Ras signaling pathway
pcad04015
Rap1 signaling pathway
pcad04060
Cytokine-cytokine receptor interaction
pcad04061
Viral protein interaction with cytokine and cytokine receptor
pcad04151
PI3K-Akt signaling pathway
pcad04380
Osteoclast differentiation
pcad04640
Hematopoietic cell lineage
pcad04668
TNF signaling pathway
pcad05010
Alzheimer disease
pcad05022
Pathways of neurodegeneration - multiple diseases
pcad05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102974293 (CSF1)
04014 Ras signaling pathway
102974293 (CSF1)
04015 Rap1 signaling pathway
102974293 (CSF1)
04668 TNF signaling pathway
102974293 (CSF1)
04151 PI3K-Akt signaling pathway
102974293 (CSF1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102974293 (CSF1)
04061 Viral protein interaction with cytokine and cytokine receptor
102974293 (CSF1)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
102974293 (CSF1)
09158 Development and regeneration
04380 Osteoclast differentiation
102974293 (CSF1)
09160 Human Diseases
09163 Immune disease
05323 Rheumatoid arthritis
102974293 (CSF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
102974293 (CSF1)
05022 Pathways of neurodegeneration - multiple diseases
102974293 (CSF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pcad04052
]
102974293 (CSF1)
Cytokines and neuropeptides [BR:
pcad04052
]
Cytokines
CSF and other factors
102974293 (CSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
DUF6203
DUF6479
Motif
Other DBs
NCBI-GeneID:
102974293
NCBI-ProteinID:
XP_007106541
Ensembl:
ENSPCTG00005003931
UniProt:
A0A2Y9EPZ6
LinkDB
All DBs
Position
4:complement(87345822..87366085)
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AA seq
554 aa
AA seq
DB search
MTARGAAGRCPPTTWLGLLLLLACLLVSRSTTEEVSENCSHMIGNGHLQFLQQLIDSQME
TSCQIAFEFVDQEQLNDPVCYLKKAFLLVQDIMEDTMRFKDNTPNAIVIVQLQELSLRLR
SCFTRDYEEQDKACVRTFYETPLQLLEKIKNVFNETKNLLKKDWNIFSKNCNNSFAKCSS
QDVVTKPDCNCLYPKATPSSDLASVSPQQPLAPSMAPMAGLTWADSEGTEGSSLLPREQA
LRTVDPGSAKQRPPRSTCQSFESPETLGVEGRPTGGSPQPQPSVGAPVPGMEDILDSVLG
TNLALEEASGEASEDLIPQGAELASRTLWRGSVQAETTRTSRLLSASSPLSGSGKGWQPA
DVTSTPLPMAGPVRPTEAWSHTPENADHSSASPRDHREPGSAGTPALHPHGLSSPSGPSS
QPRLPTSLSWGNVLPLGELEGKRSTRDRRSTTELEGGQASEGAAKPPARFNSVPLTDAGH
ERQHKEPSDPQLPGFVFRLLVPSIILVLLAVGGLLFYRRRRRSHREPQTVDSPMEQPEGS
PLTQDEDRQVELPV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcggggcgccgccgggcgctgccctcccacgacatggctgggcctcctgctg
ctgctggcctgtctcctcgtgagcaggagtactaccgaggaggtgtcggagaactgtagc
cacatgattgggaacggacacctgcagttcctgcagcagctgattgacagtcagatggag
acctcgtgccaaattgccttcgagtttgtagaccaggagcagttgaacgaccccgtgtgc
taccttaagaaggcatttctcctggtgcaagacataatggaggacaccatgcgcttcaaa
gacaacacccccaatgccattgtcattgtccagctccaggaactctctctgaggctgagg
agctgcttcaccagggactatgaagagcaggacaaggcctgtgtccgaactttctatgag
acacctctccagttgctggagaagatcaagaatgtctttaatgaaacaaagaatctcctt
aaaaaggactggaacattttcagcaagaactgcaacaatagctttgctaaatgctccagc
caagatgtggtgaccaagcctgattgcaactgcctgtaccccaaagccacccctagcagt
gacctggcctctgtctcccctcagcagcccctcgccccctccatggcccctatggctggc
ttgacctgggctgactctgaggggacagagggcagctccctcttgcccagagagcaggcc
cttcgcacagtggacccgggcagtgccaagcagcgaccacccaggagcacctgccagagc
tttgagtcaccagagaccctgggcgtcgagggccgccccactggaggttcacctcagccc
cagccctctgtcggagctcctgtccctgggatggaggacattcttgactctgtgctgggc
actaacttggccctggaagaggcctccggagaggctagtgaggatctcataccccaaggg
gcagagcttgcctcccgcacgttgtggagaggcagcgtccaggcagagactaccaggacc
agccgtctcctctcagcatcttcaccactctctgggtcaggaaagggctggcagcctgcg
gatgtaactagcacaccactgcccatggcgggccccgtgagacccaccgaggcctggagt
cacacacctgagaatgcagaccattcatctgcctcgcccagagaccaccgggagccaggc
tctgccgggaccccagcactgcacccgcacggcctcagcagtccctctggcccctcttct
cagccaaggcttcccacaagcctttcctggggcaacgtgctgccccttggggagctggaa
ggcaagaggagcaccagggaccggaggagcaccacagagctggaaggaggacaagcaagt
gagggggcggccaagcccccagcccgttttaactccgttcctttgactgacgcaggccat
gagaggcaacacaaggaaccctccgacccccagctccccggctttgtcttccgcctgctg
gtgcccagcatcatcctggtcctgctggctgtcggcggcctcctgttctacaggcggagg
cggcggagccatcgagagccccagacagtggattctcccatggagcaaccagagggcagc
cccctgacccaggatgaggacagacaggtggaactgccagtgtag
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