Physeter macrocephalus (sperm whale): 102974332
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Entry
102974332 CDS
T06011
Symbol
TDP2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2 isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102974332 (TDP2)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
102974332 (TDP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
UBA_4
Exo_endo_phos2
UBA_8
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
102974332
NCBI-ProteinID:
XP_007116301
Ensembl:
ENSPCTG00005015130
UniProt:
A0A2Y9F6W7
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All DBs
Position
18:88932411..88945028
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AA seq
365 aa
AA seq
DB search
MEQKGGPDGAPEAELEEGEPEVKKRRLMCVEFASVASCDAAVAQCYLAENDWEMERALDS
YFEPAVEESALKSHLETTSEPESCVDLTKEETSDSISSKTSTSENVQQEDGSIFSFITWN
IDGLDLNNLPERARGVCSYLTLYSPDVVFLQEVIPPYSAYLKKKASSYEIITAFEGHEEG
YFTAIMLKKSRLKFKSQEIIPFPNTEMMRNLLCVHVSVSGNELCLMTSHLESTRRHAKER
MNQLKMVLKKMQEAPESATVIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPEHCQYTW
DTQMNSNLGIAATCKLRFDRIFFRAAAEGGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCN
LDVIL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaagggcggtccggacggtgcaccggaggctgagctggaggagggagagccc
gaggtgaagaagcggagacttatgtgtgtggagtttgcctcggtcgcgagttgcgacgcc
gccgtggctcagtgctacctggccgagaacgactgggagatggaaagagcgctggactcc
tacttcgagccggccgtggaggagagcgctttaaaaagccatcttgagaccacttctgag
cccgagtcctgtgttgacctaaccaaggaagaaacaagtgattccattagttctaaaacc
agcacatctgaaaatgttcagcaagaagatggcagcatattctctttcattacctggaat
attgatggattggacctaaacaatctgccagagagggctcgaggggtgtgttcctattta
actttgtacagcccagatgtggtatttctacaggaagttattcccccatattctgcctac
ctaaagaagaaagcaagtagttacgagattattacagcatttgaaggtcatgaagaagga
tatttcacagctataatgttgaagaaatcgagattgaaatttaaaagccaagagattatt
ccttttccaaatacagaaatgatgaggaaccttttgtgtgtgcatgtgagtgtgtcagga
aatgaactttgccttatgacttctcatttggagagcaccagaaggcatgctaaggaacga
atgaatcagttgaaaatggttttaaagaaaatgcaagaggctccagagtcagctacagtt
atatttgcaggagatacaaatttaagggatcaagaagttaccaaatgtggtggtttaccc
aacaacattttggatgtctgggagtttttgggcaaacctgagcattgccagtatacatgg
gatacacagatgaactcgaatcttggaatagctgctacctgtaagcttcgttttgatagg
atattttttagagcagccgcagaaggcggccacattattccccgaagtttggacctcctt
gggttggagaaactggactgtggtagatttcctagtgaccactggggtcttctgtgcaac
ttagatgtgatattgtga
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