KEGG   Physeter catodon (sperm whale): 102974380
Entry
102974380         CDS       T06011                                 
Symbol
YOD1
Name
(RefSeq) ubiquitin thioesterase OTU1
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102974380 (YOD1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pcad01002]
    102974380 (YOD1)
Peptidases and inhibitors [BR:pcad01002]
 Cysteine peptidases
  Family C88
   102974380 (YOD1)
SSDB
Motif
Pfam: OTU OTU1_UBXL Ubiquitin_2 zf-C2H2_2
Other DBs
NCBI-GeneID: 102974380
NCBI-ProteinID: XP_007105527
UniProt: A0A2Y9EN89
LinkDB
Position
4:38238215..38240821
AA seq 348 aa
MFGPAKGGYFGVHPPASYPVSVCQPAARTKAGPTGVWPVDGRTDTMWRLRCKAKDGTHVL
QGLSSRTQMRELQGQIAAITGIAPGCQRILVGYPPECLDLSNGDTILGDLPIQSGDMLIV
EEDQTRPKMSPAFTKHGAPSYIRETLPVLTRVVVPADNSCLFTSVYYVVEGGVLNPACAP
EMRHLIAQIVASDPNFYSKAILGKTNQEYCDWIKRDDTWGGAIEISILSKFYQCEICVVD
TQTVRIDRFGEDAGYTKRVLLIYDGIHYDPLQCVFPNPDTPPLTIFSSNDDIVLVQALEL
ADEARSKRQFTDVNRFTLRCMVCQKGLTGHAEARDHAKETGHTNFGEV
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtttggaccggcaaagggtggctattttggagtccacccgccggcttcttacccagtc
agcgtctgccaacctgctgccaggaccaaagctggccccacgggtgtctggcctgtggac
ggccggaccgacacgatgtggcggctccgctgcaaggccaaggatggcacccatgttttg
caggggttgtccagccggacccagatgcgggaactccagggccaaattgccgccatcacc
gggatcgcccccggctgtcagcgaatcctcgtcggatacccacccgagtgcctggacctc
agcaacggggataccattctgggggatttgcccattcagtcaggcgacatgctgattgtt
gaagaagaccaaaccaggcccaaaatgtcacctgcatttacaaaacatggtgctcctagt
tacatcagggaaactttgcctgtgcttaccagagtggtggtcccagcagacaactcttgc
ctctttaccagtgtgtactatgttgttgaaggaggagtcttgaatccagcttgtgcccct
gagatgagacacctcatagcacaaattgtagcaagtgatccaaacttctatagcaaggca
atactgggaaaaacaaatcaagagtactgtgactggatcaaaagggatgatacttggggt
ggagctattgagatatccattttgtctaagttttatcaatgtgaaatatgtgtggtggat
acacagacagtacgaattgatcgttttggggaagatgcaggatataccaaaagggtcctg
cttatttatgatggcatccactatgatccgcttcagtgtgtcttccccaacccagacaca
cctcctctgaccattttctcctctaatgatgatattgttcttgtgcaagcactggaatta
gcagatgaagctagaagcaagagacagtttactgatgtaaaccgcttcaccctgagatgc
atggtatgtcagaagggattaactggacacgcagaagcaagggaccatgccaaggagaca
ggccataccaacttcggagaagtgtga

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