Physeter macrocephalus (sperm whale): 102974389
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Entry
102974389 CDS
T06011
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X3
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102974389 (DDX1)
03016 Transfer RNA biogenesis [BR:
pcad03016
]
102974389 (DDX1)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102974389 (DDX1)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102974389 (DDX1)
Transfer RNA biogenesis [BR:
pcad03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102974389 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
102974389
NCBI-ProteinID:
XP_007106948
Ensembl:
ENSPCTG00005014405
UniProt:
A0A2Y9ERP9
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All DBs
Position
12:36524729..36563800
Genome browser
AA seq
744 aa
AA seq
DB search
MTHSMLYIKEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF
SIPVIQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV
KEWHGCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHN
KQFDNYGEEFTMHDTIGCYLDMDKGHVKFSKNGKDLGLAFEIPPHMKNQGLFPACVLKNA
ELKFNFGEEEFKFPPKDGFVALSKAPDSFIVKSQHTGNAQVAQTKFLPNAPKALIVEPSR
ELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVST
GKLNLSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVK
KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKADRLWERLGKNHIRTDEVHAKDNTR
PGANSPEMWSEAVKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDRK
GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK
QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM
QLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTAGGGSYKGHVDILAPTVQELA
ALEKEAQTSFLHLGYLPNQLFRTF
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgacacacagcatgctctacataaaagagatgggtgttatgcctgaaattgctcaagct
gtggaagagatggattggcttctcccaactgatatccaggctgagtccatcccactgatc
ctaggaggaggtgatgtccttatggctgcagaaacaggaagtggaaaaactggtgctttc
agtattccagttatccagatagtttatgaaactctgaaagaccaacaagaaggcaaaaaa
ggaaaagcgacaattaaaactggtgcttcagtgctgaacaaatggcaaatgaacccatat
gatagaggatctgcttttgcaattgggtcagatggtctttgctgtcagagcagagaagta
aaggaatggcatggatgtagagctactaaaggattaacgaaagggaaacactactatgaa
gtatcctgtcatgaccaaggattgtgcagagttgggtggtcttctatgcaggcttcccta
gacctaggtactgacaagtttggatttggctttggtggaacaggaaagaaatctcacaat
aaacaatttgataattatggagaggaattcactatgcatgataccattggatgttaccta
gatatggataaagggcatgtcaaattctccaaaaatggaaaagaccttggtctggcattt
gaaataccaccacatatgaagaaccaaggcctctttcctgcctgtgttttgaagaatgct
gaactaaaattcaacttcggggaagaagaatttaagtttccgccaaaagatggttttgtt
gccctttccaaggcaccggatagtttcattgtcaaatcacagcacacaggtaatgctcag
gtggcacaaacgaagtttctccccaatgctccaaaagctctcattgtcgaaccttcccga
gagttggctgaacaaactttgaataacgtcaagcagtttaagaaatacgtcgataatcct
aaattaagggagcttctgataattggaggtgttgcagcacgggatcagctctctgttttg
gataatggggtagatatagttgttggcactccaggaagactggatgatttggtgtcaact
ggaaagctgaacttatcgcaagttagattcctggtcctggatgaagctgatgggcttctt
tctcaaggttactctgattttataaataggattcacaatcagattcctcagattacctct
gatggaaaaagacttcaggtgattgtttgctcagccactttgcactcttttgatgtgaag
aaactgtctgagaagatcatgcactttcccacctgggttgatttgaaaggagaagattct
gttccagatactgtccaccatgttgttgtcccagtgaatcccaaagctgacagactctgg
gaaaggcttgggaaaaaccacattaggactgatgaagtacatgcaaaagataatacaaga
cctggtgctaacagtccagagatgtggtctgaagctgttaaaatcctgaagggggagtat
gctgtccgagcaatcaaggagcacaagatggatcaagcaattattttctgtagaaccaag
atcgactgtgataacttagagcagtattttatgcaacaaggaggaggacctgatagaaag
gggcaccagttctcatgtgtgtgtcttcatggtgacagaaagcctcacgagaggaagcaa
aacttggaaagattcaagaaaggagatgtaagattcttgatttgcacagatgtagccgcc
agaggaattgatatccatggtgttccttatgttataaatgtcaccttgcctgatgaaaag
caaaactatgtccatcgaatcggcagagtaggaagagctgaaaggatggggctggccatt
tccctggtggcaacagaaaaagagaaggtttggtaccacgtatgtagcagccgtggaaaa
gggtgttacaacacaagactcaaggaagatggtggctgtaccatatggtacaatgagatg
cagttgctgtctgagatagaagaacatctgaactgtaccatttctcaggttgagccagat
ataaaggtaccagtggatgaatttgatgggaaagttacttatggtcaaaaaagaactgct
ggtggtggaagctataaaggccatgtggatattttggcacctacggttcaagagctggct
gcccttgaaaaggaggcacagacgtctttcctgcatcttggctaccttcctaaccagttg
ttcagaaccttctga
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