Physeter macrocephalus (sperm whale): 102974663
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Entry
102974663 CDS
T06011
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102974663 (PDZRN4)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102974663 (PDZRN4)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102974663 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
Sina_ZnF
zf-rbx1
zf-RING_6
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102974663
NCBI-ProteinID:
XP_023978696
Ensembl:
ENSPCTG00005017632
UniProt:
A0A2Y9SJA5
LinkDB
All DBs
Position
6:complement(96655265..97071222)
Genome browser
AA seq
1027 aa
AA seq
DB search
MGFALERFAEAVDPDFQCRLCGQVLEEPLCTPCGHVFCARCLMPWAARRRRCPLQCQPLA
PGDLYRVLPLRSLVQKLRTQCDYRARGCGHSVGLRELAAHVERCDFGPARRRRRGCVSGP
GGGDASARGGCGSAPGVRRGGTPGVRGGSGRAPGPQVLAWRRREKALLAQLWALQGEVQL
TARRYQEKFTQYMAHVRKFARDPGGGRGRDGEHKPFTIVLERENDTLGFNIIGGRPNQDN
QEEAPMEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVEAFRNAKEPIV
VQVLRRTPLSKPAYGTAPEVRLVNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDS
CHSLHPMEHEFYEDNEYLSSLPADADRTEDFEYEEVELCRVNSQEKLGLTVCYRTDDEED
TGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQDREAAVALLSSDECRRIVLLVARPE
SQLEEGWLEDERNEYLEELNLSMLEEQHNEAMQRTAGEVEQPKKQEEEEGTTDTATSSSN
NHEKDSGVGRTDESLRNDESSEQENAAEHPNDTSLKSKRELGQSQDTLGSVELQCNESFV
SGEYIDSDCIGNQDEECERFRQLLELKCKIRKHGEYDLYYSSSTIECNQGGREGVEHELQ
LLNEELRNIELECQNIMQAHRLRKVTDQYGDIWALHDGGFRNYNTSIDTQRGKLDDILEH
PEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMAANQSSSGQSS
KESTKAKTTEQGCGVEGKEQTSESSKLSDPEKTSGEHIPYLSPYHSSSYRYANIPTHARH
YQSYMQLIQQKSAVEYAQSQLSLVSVCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDR
ILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLE
CLKESPQSGSEGKKEVNIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVPNA
FLSVTTV
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgccgaagcggtggacccggatttccagtgcaggctg
tgcggccaggtgttggaggagcccctgtgcacgccgtgcgggcacgtcttctgcgcccgc
tgcctgatgccctgggcggcacggcggcgccggtgcccgctgcagtgccagcccctggca
ccgggcgatctgtacagggtgttgcctctgcgcagcctcgtccagaagctgcgcacccag
tgcgactaccgcgcccgcggctgcggccactcggtcgggctgcgcgagctggcggcgcac
gtcgagcgctgcgacttcggccctgcccgccgccgccgccggggctgcgtctccgggccg
ggcggcggggacgcgtccgcgcgggggggctgcggctcagcgcccggggttcgccgcggc
gggacgccgggagtccgtggcgggagcgggcgggcgccagggcctcaagtcctggcctgg
aggcggcgcgagaaggcgctgctggcgcagctctgggcactgcagggggaggtgcagctc
acggcccgcaggtaccaggagaagttcacccagtacatggctcacgtccgcaaattcgcc
agggacccgggcggcggccgcggccgggatggagaacataagccattcactattgtgtta
gaaagagaaaatgacactttgggattcaatattataggaggtcgaccaaatcaggataat
caagaagaagcaccaatggaaggaatttatgtttcaaagattttggaaaatggacctgct
gatagagcagatggcttggagattcatgacaaaatcattgaggtcaatgggaaggatctc
tcaaaggccacccatgaagaggcagtggaagcttttcgaaatgccaaggagcccattgtg
gtccaggtgctaaggcgaacacctctcagtaaaccagcctatgggacggccccagaagtg
cggctcgtgaatgccagcactcagacggacatcacctttgaacatatcatggccctggcc
aaacttaggccacccacccctccagtgcccgacatctgtccatttctgctctcagacagc
tgccattctcttcatccgatggagcatgaattttatgaggacaatgagtatctttccagc
ttgcctgctgatgcagacagaacagaggactttgaatatgaggaggtcgagttgtgtcgt
gttaacagtcaagagaagctgggcctgacagtctgttaccgaacagatgatgaagaagac
accggcatttatgtcagcgaggtagatccaaacagcattgctgccaaagatggccggatt
cgagaaggggatcgtattttgcaaataaatggggaagacgtccaggatcgggaggcggcg
gtggccctgctgtctagtgatgagtgccggagaatcgtgctgctggtcgcaaggccggag
agtcagctggaggaaggctggctggaagatgaaaggaatgaatatttagaggagttaaac
ttgtcgatgttggaagaacagcataatgaagcaatgcagcgcactgctggtgaggtggag
cagccaaaaaaacaagaagaagaagaaggcacaacagacacggcaacctcttcatccaac
aaccatgagaaagacagtggagtggggcgcacagatgaaagcttgcggaatgacgagagc
tcagagcaggagaatgcagccgagcatcccaatgacacatctttgaagagcaagagagag
ttggggcagagccaagacactctgggaagcgttgaacttcagtgtaatgagagcttcgtg
tctggtgaatacattgactcagactgtattggcaaccaagatgaggagtgtgaaaggttt
cggcagctcttggagctcaaatgcaagattcggaagcatggagagtatgacctgtattac
tcaagcagcacaatagaatgcaatcaagggggacgagaaggagtggagcacgaactacag
ttgcttaatgaagaactaagaaacattgaacttgagtgccaaaatatcatgcaggctcac
aggctccggaaagtgacagaccagtatggagacatctgggcattgcatgatggaggattc
cgaaattataacaccagcatagatacgcagaggggaaaactagatgacatcctcgaacac
ccagaaaagtcagacaaagacagttctagtgcttacaacacagctgaaagctgcagaagc
actccactcactgtggaccgttcccctgacagttcccttccaagaatgatcaacctcacc
aataagaaaaacctgagaagcacaatggcagccaatcagtcctcttctggacagagtagt
aaagagtcaaccaaagccaaaaccactgaacaaggttgcggcgttgaaggcaaagagcag
acttcagaaagcagcaagctttctgatccagagaagaccagcggtgaacacatcccttac
ctctctccttaccacagctcctcctatagatatgcaaacatcccaacacatgcccggcat
tatcaaagctacatgcagttaattcaacagaagtccgcggtcgagtacgctcagagtcag
ctcagcttggtgagcgtgtgcaaggagtctcagaagtgctcagaacccaagatggaatgg
aaggtgaaaatcaggagtgacgggacacggtacatcaccaagagacccgtgagggaccgc
attctgaaggagcgtgccttaaagatcaaggaggagcggagtggcatgacgacggacgat
gacaccatgagtgagatgaaaatggggcgctactggagcaaagaggagaggaagcaacac
ctggtgcgggccaaagagcagcgtcgccgccgagagttcatgatgcggagccggttggag
tgtctcaaggagagtccccagagcggcagcgagggcaagaaggaggtcaacatcattgaa
ctgagtcacaaaaagatgatgaagaagagaaacaagaaaattttggacaactggatgaca
atccaagaactgatgacccatggggccaagtcccctgatggcacacgagttcctaatgcc
tttttgtcagtcaccacggtatga
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integrated database retrieval system
