Physeter catodon (sperm whale): 102974901
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Entry
102974901 CDS
T06011
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03420
Nucleotide excision repair
pcad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102974901 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
102974901 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102974901 (ERCC8)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102974901 (ERCC8)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
102974901 (ERCC8)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
102974901 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Nup160
Motif
Other DBs
NCBI-GeneID:
102974901
NCBI-ProteinID:
XP_007116528
Ensembl:
ENSPCTG00005010440
UniProt:
A0A2Y9F780
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Position
8:complement(64570409..64637516)
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AA seq
396 aa
AA seq
DB search
MLGFLSARQAGLDDPLRLRRAESTRRVLGLELNKDRDVERIHGSGVNTLDIDPVEGRYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQIADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYEYILATASADSRTKLWDVRRASGCLITLDQHNGKKSQAVESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVYNDSRKGLKFTVS
CGCSSEFVFVPYGSTIAIYTVYSGEQITMLKGHYKSVDCCVFQSNFQELYSGSRDCNILA
WIPSLYESVPDDEETSTRSQLNPAFEDAWSSSDEEG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctagggtttttgtcggcacgacaagcgggtttggacgaccctcttcgccttcggaga
gcggagtccacacggagggttttgggactggagttaaacaaagacagagatgttgaaagg
atccatggcagtggagttaacacccttgacattgaccctgttgaagggagatacatgtta
tcaggtggttcagatggtgtgattgtgctttatgatcttgagaactccagcaggcaacct
tattacacatgtaaagcagtgtgttccgttggcagaagccatcctgatgttcacaaatat
agtgtggagactgtacagtggtatcctcatgacactggcatgttcacatcaagctcattt
gataaaactctgaaagtatgggatacaaatacattacaaattgcagatgtatttaatttt
gaagaaacagtttatagtcatcatatgtctccagttgccaccaagcactgtttggtagca
gttggtactagagggcccaaagtacaactttgtgacttaaagtctggatcctgttcccac
attctacagggtcacagacaagaaatattggcagtttcctggtcaccgcgttatgagtat
atcttggcaactgcaagtgctgacagtagaacaaaattatgggatgtgaggagagcatca
ggatgtttgattactcttgatcagcataatgggaaaaagtcacaagcagttgaatcagca
aacactgctcataatgggaaagttaatggcttatgttttacaagtgatgggcttcacctc
ctcactgttggtacagataatcgaatgaggctctggaatagttccaatggagaaaacaca
ctagtgaactatggaaaagtatataatgacagtagaaaaggattgaaattcactgtctcc
tgtggctgcagttcagaatttgtttttgtaccatatggtagcaccattgctatttataca
gtttactcaggagaacagataactatgcttaagggacattataaaagtgttgactgctgt
gtatttcagtctaatttccaggaactttatagcggtagcagagactgcaatattcttgct
tggataccatccttatatgaatcagttcctgatgatgaggagacgtcaaccagatcacag
ttaaatccagcatttgaagatgcctggagcagcagtgatgaggaaggatga
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integrated database retrieval system
