Physeter macrocephalus (sperm whale): 102975041
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Entry
102975041 CDS
T06011
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102975041 (TMF1)
Membrane trafficking [BR:
pcad04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
102975041 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Vps27_GAT-like
Motif
Other DBs
NCBI-GeneID:
102975041
NCBI-ProteinID:
XP_007105976
Ensembl:
ENSPCTG00005010922
UniProt:
A0A2Y9EPQ4
LinkDB
All DBs
Position
18:25602523..25632127
Genome browser
AA seq
1093 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQEEEPSAWAETIPYGEPGISPPVSGGWDTS
TWGLKSNTEPQNQPVASPKAITKPVRRTVVDESENFFSAFLSPTDVQTIQKSPVVSKPPA
KSQRPEEEVKSTLQESLHAGQSRTTEAAESKVEDSPPFVSGETLAASTLSPKTEGKHEES
LNKESDTKVSAGHLKVSESVINVKTTRENVSNMPTQPLTAETKDMALEPKEQKHEDRQSN
TPSPPVSTFSSGTSTTSDIEVLDHESVISESSASSRQETTDSKSSLHLMQTSFQLLSASA
CPEYNRLDDFQKLTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELSGKGYALVPIIV
NSSTPKAKTVESVEGKPEEANETLIMPTEETEMEESGRSATPVNCEQPDILVSSTPVNEG
HTVLDKVAEQPEAPESEPEALSEKEDVIKTVEFLNEKLDKREAQLLSLSKEKALLEEAYD
NLKDEMIRVKEESSSISSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKSIKEELATRLN
SSETADLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDRENENIIAKLNKKVKEL
EEELQHLKQVLDGKEEVEKQHRENIKKLNSMVERQEKDLGRLQVDMNELEEKNRSIQAAL
DSAYKELTDLHKANAAKDSEAQEAALSREMRAKEELSAALEKAQEEARQQQETLVIQVGD
LRLALQRAEQAAARKEDYLRHEISELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQA
TLGSQTSSWEKLEKNLSDRLGESQTLLAAAVERERAATEELLANKIQMSSMESQNSLLRQ
ENSRFQAQLESEKNRLRKLEDENNRYQVELENLKGEYVRTLEETRKEKTLLNSQLEMEKM
KVEQERKKAIFTQEAVKEKERKPFSVSSTPTMSRSSSISGVDMAGLQTSFMSQDELHDHS
FGPMSVSANGSNLYDAVRMGAGSSIIENLQSQLKLREGEITHLQLEIGNLEKTRSIMAEE
LVKLTNQNDELEEKVKEIPKLRTQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMY
KTQIDELLRQRLS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcccagctctccagcttcgccaagcaggccctgtctcaggcc
cagaagtccatcgacagggtcctggacatccaggaagaggagccgagcgcctgggccgag
accattccgtacggagagccgggaataagtccccctgtcagtggaggatgggatacttca
acctgggggttaaaatccaacactgaacctcagaatcaaccggtagcctctcctaaagca
attacaaagccagttcggagaactgtggtagatgaatctgaaaatttcttcagtgccttt
ctctctcccaccgatgtccagaccattcagaagagtccagtggtatcaaaaccaccagct
aaatcacagcgaccagaagaagaagtgaaaagcaccttacaggagtccttgcacgctgga
cagtcaagaacaactgaagccgctgagtcgaaagtagaagactctcctccatttgtatcg
ggggaaactctggcagccagtactctgtctcctaaaactgagggcaagcatgaagaaagt
cttaataaagaatctgatacaaaggtgtcagcaggacatttgaaagtatctgaaagtgta
attaatgtgaaaacaactagggaaaatgtatctaatatgcctacacagcctctcacagcg
gaaacaaaggacatggctttggaacctaaggagcaaaaacatgaagacagacagagcaat
acaccttctcctcctgttagtaccttctcatcaggtacttctaccactagtgatattgaa
gttttagatcatgaaagtgtaataagtgagagctcagcaagttcgagacaagagactacg
gattcaaaatcaagtctgcacttgatgcagacatcctttcagcttctctcagcatctgct
tgtcctgaatataatcgtttagatgatttccaaaaactcactgagagttgctgctcatct
gatgcttttgaaagaatagactcgtttagtgtacagtcattagatagccgtagtgtaagt
gaaatcaattcagatgatgagttgtcaggcaagggatatgctttagtacctattatagtt
aattcttcaactccaaaggctaaaacagttgagtctgttgaaggaaaacctgaagaagca
aatgaaacattaattatgcccactgaagaaacagaaatggaagaaagtggacgaagtgca
actcctgttaactgtgaacagcctgatatcttggtttcttctacaccagtaaatgaaggg
catactgtcctagacaaggtggctgagcagcccgaagctcctgaaagtgagccagaagca
ctttctgagaaggaagatgtaatcaagacagttgagtttctgaatgagaaactggataaa
agggaagctcagttattatctcttagtaaagaaaaagcacttctagaagaagcttatgat
aatctgaaagatgaaatgatcagagtgaaagaagagagcagcagcatttcttccttgaaa
gatgagtttactcaaagaattgcagaagcagaaaagaaagttcagctagcctgcaaagag
agagatgctgctaaaaaggaaatcaaaagtataaaagaagaacttgctactagattaaat
agcagtgaaacggcagaccttttgaaagagaaagatgagcagatccgagggttaatggaa
gaaggagaaaaactttcaaaacagcagctgcataattctaacatcattaagaaattaaga
gctaaagacagagaaaatgaaaatattattgcaaagctgaacaaaaaagttaaagagcta
gaagaagagttacaacatttaaaacaggtccttgatggcaaagaagaggttgagaaacaa
catagagaaaatattaagaaactaaattctatggtagaacgccaagagaaggatcttggc
cgacttcaagtagacatgaatgaacttgaagaaaagaaccgaagtattcaagctgctctt
gatagtgcatacaaagaacttactgatcttcacaaagccaatgctgcaaaggatagtgag
gcccaggaagctgctctaagtcgtgaaatgagagctaaagaagaactttctgcagcattg
gagaaggcccaagaagaagcccgtcagcagcaagaaacattagtgattcaagtgggggac
cttaggctggcactgcaacgtgcagaacaagcagctgccagaaaagaggattatttacgt
catgagatcagtgaactccagcagagactccaggaagcagagaatcgaaaccaagaactg
agtcaaagtgtttcatcaacaacaagaccattgcttcgacagatagaaaatttgcaagca
actctagggtcccagacgtcatcatgggagaagttagagaagaatctttctgatagactt
ggtgaatcccagaccttgttggcagcagcagttgagagagaacgtgcggccacagaagaa
cttcttgccaacaaaattcaaatgtcttccatggagtcacagaattctctcttaagacaa
gaaaacagtagatttcaggcccagctagaatcagagaaaaataggctaagaaaactagag
gatgaaaataataggtaccaggttgaattagaaaacctaaaaggtgaatatgtaagaaca
cttgaagagacaaggaaagaaaagacactgttgaatagtcagttagaaatggagaaaatg
aaagttgaacaggaaaggaagaaagcaattttcactcaagaagcagtaaaagaaaaggaa
cggaagccattttctgtttctagcactcccacaatgtcacgctcaagttcgataagtgga
gttgatatggcagggctacagacatcttttatgtctcaggatgagcttcatgatcactca
tttggaccaatgtctgtatcagcaaatggaagcaatctttatgatgctgtaaggatggga
gcaggatcaagcattattgaaaatctacagtctcagctgaagctaagggagggagaaatt
actcatttacagctagaaattggcaatctagaaaaaacacgctccataatggctgaagag
ctagttaaattaacaaatcaaaatgatgaacttgaagagaaagtgaaggagatacccaaa
cttcgaactcagctaagagatttggatcaaagatacaacactattctgcagatgtatgga
gaaaaagcagaagaggcagaagaacttcgattagatcttgaagatgtaaaaaatatgtat
aagactcaaatagatgaacttttaagacaaaggctcagttaa
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integrated database retrieval system
