Physeter macrocephalus (sperm whale): 102975094
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Entry
102975094 CDS
T06011
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1 isoform X2
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102975094 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102975094 (NEIL1)
Enzymes [BR:
pcad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
102975094 (NEIL1)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102975094 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
102975094
NCBI-ProteinID:
XP_007120781
Ensembl:
ENSPCTG00005016654
UniProt:
A0A2Y9FE54
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All DBs
Position
11:66458892..66465336
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AA seq
447 aa
AA seq
DB search
MHTWPNLLSSSSTGPGHPSHRMPEGPELHLASHFVNEACRELVFGGCVEKSPVSRNPEVP
FESSAYHISALARGKELRLTLSPLPGAQPPRGPLALVFRFGMTGSFQLVPSDALPPHAHL
RFYTAPPDPRLALCFVDIRRFGHWDLGGKWQPGRGPCVLLEYEQFRENVLRNLADKAFDR
PICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLEALQQRRPSPELTLSQKIRAK
LQNPDLLELCHSVPKEVVQLGGKGYGPESTEEDFAAFRAWLQCYGTSGMSSLRDRHGRTI
WFQGDPGPLAPKVPTPTLGGTPEWEHGNLEKVGRGHKTLQPHQQQYPAGGKSRKKKSKGA
QRGPEDQVEDPPPPNKAPSRTRRARRGLPEQTAAQQPKGTSLQRDPEAPRVPEKGKRRRQ
PATSGRRRPQKIKADTPSLEPEETSAS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcacacctggcccaacctgctgtcatcctcctccacagggcctggccacccctcccac
agaatgcctgagggccctgagctgcatctggccagccactttgtgaacgaggcatgcagg
gagctggtgtttggtgggtgtgtggagaagtcacctgtcagccgcaaccctgaggtgccc
tttgagagcagcgcctaccacatctcagctttagcccgaggcaaggagctgcgcctgaca
ctgagccccctgcctggggcccagcccccacgggggccactggcccttgtcttccgcttt
ggcatgaccggctccttccagctggtgcccagcgatgcgctgccaccccatgcccatctg
cgcttttacacggctccccctgacccccgacttgccctctgcttcgtggacatccgccgc
tttggccactgggacctcgggggcaagtggcagccaggccgcgggccgtgtgtcttgctg
gagtacgagcagttcagggagaatgtgttacgaaacctggcagacaaggcctttgaccgg
cccatttgtgaggccctcttggaccagaggttcttcaatggcattggcaactatctgcgg
gcagagatcctataccggctgaagataccccccttcgagaaggcccgcacggttctggag
gcactgcagcagcgcaggccgagcccggagctgaccctgagccagaagatcagggccaag
ctgcagaacccagacttgctggagctgtgccactcagtgcccaaggaagtggtccagctg
gggggcaaaggctatgggccggagagcacggaggaggactttgctgccttccgagcctgg
ctgcagtgttatggcacgtcgggcatgagctccctgcgggaccggcatggccgcaccatc
tggttccagggggatcctggacccttggcgcccaaagtccccactccaacccttggaggc
actccagagtgggagcatgggaatctagagaaagtgggccgcggccacaagaccctccaa
ccccatcagcaacagtatcctgcagggggcaagtcccgcaagaagaaatccaagggagca
cagcggggtcctgaggaccaagtggaggaccctccacctccaaacaaggccccttcaagg
acacgaagggcacggagaggcctccctgagcagactgcagcccagcagcccaaggggacc
agcctccaacgggacccagaagccccccgtgtccctgagaaagggaagaggaggaggcaa
ccagcgacctcaggccgccgcagaccccaaaagatcaaggctgacaccccatctttggag
cctgaggagacctcagcctcttag
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