Physeter macrocephalus (sperm whale): 102975143
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Entry
102975143 CDS
T06011
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04390
Hippo signaling pathway
pcad04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
102975143 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102975143 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102975143 (SOX2)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102975143 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102975143
NCBI-ProteinID:
XP_007126914
Ensembl:
ENSPCTG00005003937
UniProt:
A0A2Y9FML7
LinkDB
All DBs
Position
1:74744851..74746352
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AA seq
323 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMM
QDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPG
MALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHM
SQHYQSGPVPGTAINGTLPLSHM
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccag
aagaacagcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcggg
cagcggcgcaagatggcccaagagaaccccaagatgcacaactcggagatcagcaagcgc
ctgggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggcc
aagcggctgcgagcgctacacatgaaggagcacccggattataaataccggccccggcgg
aaaaccaagacgctcatgaagaaggataagtacacgctgccgggagggctgctcgccccg
ggcggcaacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaac
cagcgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatg
caggaccagctgggctacccgcagcacccgggcctcaacgcgcacggcgccgctcagatg
cagcccatgcaccgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcag
acctacatgaacggctcgccgacctacagcatgtcctattcgcagcagggcacccctggc
atggctcttggctccatgggctcggtggtcaagtccgaggccagctccagcccccccgtg
gttacctcttcttcccactccagggcgccctgccaggccggggacctccgggacatgatc
agcatgtacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatg
tcgcagcactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctc
tcgcacatgtga
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integrated database retrieval system