Physeter macrocephalus (sperm whale): 102975240
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Entry
102975240 CDS
T06011
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcad04515
]
102975240 (PCDH18)
Cell adhesion molecules [BR:
pcad04515
]
Cadherins
Protocadherins
102975240 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
BBS1
TMEM154
Cadherin_C_2
DUF3418
Motif
Other DBs
NCBI-GeneID:
102975240
NCBI-ProteinID:
XP_007126138
Ensembl:
ENSPCTG00005013496
UniProt:
A0A2Y9FLC6
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All DBs
Position
7:complement(139193878..139207766)
Genome browser
AA seq
1135 aa
AA seq
DB search
MYQMNAKMHIGFVFALLVVSFNSDVLGKNLKYRIYEEQTVGSVIARLSEDVADVLVKLPN
PFTVRFRAMQRGSSPLLVVNEDSGEISIGAKIDREQLCQKNSNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPRFSRALIPIEISESAAVGTRIPLDGAFDPDVGENSLHAYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPIGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNAIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYVFEGDPIDTFVALVRVQDKDSGLNGEIVCRLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQVNDVNDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVAFTIIDENDNIPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAMDRDSGVNAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVIIQD
KGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLAIMVLF
ATRCHREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRPSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHPSLEDDTQPVDSGEKKKSFSTFGKDSPNEEDSGDTSTSSLLSEMSNVFQRLLPPSL
DTYSECSEMDRSNSLERRKGPLSAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHASVQ
PSSKWLPAMEEIPENYEEDDFDNVLSHLGDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagatgaacgctaaaatgcacattggatttgtttttgcactcctggtggtatct
ttcaactccgacgtactgggcaagaatctgaaatacaggatttatgaggagcagacggtt
ggctcggtcattgcaagactatcagaggatgtggctgatgttttagttaagctaccgaat
ccttttactgttcgcttccgagccatgcaaaggggaagttctcctctactcgtggtcaac
gaggacagcggggaaatcagcataggggcaaaaattgaccgcgagcagctatgccagaaa
aactcgaactgttccatagagtttgacgtgatcactctacccactgagcatttgcagctc
ttccacattgaagttgaagtgctggatattaatgacaattctccccggttttcaagagct
ctcataccaattgagatatccgagagcgcagcggttgggacgcgcatccctctggacggt
gcatttgatccggatgttggggaaaattccctccacgcgtactccctctctgccaatgat
ttttttaatatcgaggttcggactaggactgatggagctaagtatgcagagctcatagtg
gttagagagctcgaccgggagctgaagtcaagctatgagcttcagctcaccgcctcggac
atgggggtgcctcagaggtctggctcatccatactaaaaatcagcatttcagactctaat
gacaacagccctgcttttgagcagcagtcttatataatacagctcttggaaaactccccc
attggcactttgctgctagatctgaatgccacggatccagatgagggcgctaatgggaaa
attgtctattccttcagcagtcatgtgtctcccaaaattatagagacttttaagattgat
tcagaaagaggacatttgactctcttcaagcaagtggattatgaaatcaccaaatcctat
gagattgatgttcaggctcaggatttgggtccaaatgcaatcccagctcattgcaaaatt
ataattaaggttgtggatgttaatgacaataaacctgaaattaacataaacctcatgtcc
cctggaaaagaagaaatatcttatgtttttgaaggggatcctattgacacatttgttgcc
ttggtcagggttcaggacaaggattctgggctgaatggagaaatagtctgtaggcttcac
ggacatggtcactttaaacttcagaagacttatgaaaacaattatttaatcttgacaaat
gccacgctggatagagaaaagaggtctgaatacagtttgactgtaatcgcagaggacaag
gggacacccagtctctcaacagtaaaacattttactgttcaagtcaatgatgtaaatgac
aacccaccccacttccagagaagtagatacgaatttgcaatctcagagaataactcgcca
ggggcgtacatcaccactgtgacagccacagatcccgatcttggagaaaatgggcaagtt
acatataccattctggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatccaatggagccatctacgccctcagaatctttgaccatgaggaggtgagtcag
atcacttttgtggtcgaagcgagagacggtggaagtccaaagcagcttgtaagcaatacc
acagttgcgttcaccatcattgacgaaaatgacaacatccctgtggttataggaccggcg
ctgcgcaataataccgcagaaatctccatccccaaaggggctgaaagcggctttcacgtc
acaagaataagggcaatggacagagactctggtgtgaatgctgaactcagctgctccata
gtggcaggtaatgaggagaacatctttgtaattgatccacgatcatgtgacatccatacc
aacgtcagcatggaatctgttccctacacagaatgggagctctcagttatcatccaggac
aaaggcaatcctcagctgcataccaaagtccttctgaagtgtatgatctttgaatatgca
gagtcagtgacaagtacagcaatgacctcagtaagccaggcctccctggatgtctccatg
attataattatctccttaggagcaatctgtgcagtgttgttggctatcatggtgctgttt
gcaactaggtgtcaccgagaaaagaaagacactagatcctacaactgcagggtagcggaa
tcaacttaccagcatcacccaaaaagaccctccaggcagatccacaaaggggacatcaca
ttggtgcctaccgtaaatggcactctgcccatcagatctcatcacaggccgtctccttct
tcatctcctaccttagaaagagggcaaatgggcagccggcagagtcacaacagtcaccag
tccctcaacagtttggtgacaatctcatcgaaccacgtgccagagaatttctcattagaa
ctcacccatgccacccctgctgttgagcaggtctcccagcttctttcaatgcttcaccag
ggacaatatcaaccaaggccaagttttcgaggaaacaaatattccaggagctatagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagca
ggagacagtgattatgatttggggcgagattctccaatagacaggttgctgggcgaagga
ttcagcgacctgtttcttacagatggaagaattccagcagctatgaggctgtgcacggaa
gagtgcagggtcctgggacactctgaccagtgctggatgccacctctgccctcaccttcc
tctgattataggagcaacatgttcattccgggggaagaattcccagcacagccccagcag
caacatccgcatccgagtcttgaggatgacacccagccggtagattctggtgagaagaag
aagagtttttccacttttgggaaggactccccaaacgaggaggactctggggataccagc
acgtcctctctgctctcggaaatgagcaatgtgttccagcgcctcttacccccttccctg
gacacctattctgagtgcagtgagatggatcgatccaactctctggaacgccggaaggga
ccactgtcagccaagacggtgggttacccacaaggggtggcggcctgggcggccagcacg
cattttcaaaaccccaccaccaactctggccccccacttggaactcatgccagcgtgcag
ccttcttcaaagtggttgccggccatggaggagatccctgaaaattatgaagaggatgat
ttcgacaacgtgctcagccacctcggcgatggcaaacatgaactcatggatgccagtgag
ctagtggctgagattaacaaactgctccaagatgtccgccagagctag
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