Physeter catodon (sperm whale): 102975241
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Entry
102975241 CDS
T06011
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04010
MAPK signaling pathway
pcad04022
cGMP-PKG signaling pathway
pcad05166
Human T-cell leukemia virus 1 infection
pcad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102975241 (SRF)
04022 cGMP-PKG signaling pathway
102975241 (SRF)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102975241 (SRF)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102975241 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102975241 (SRF)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
102975241 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
102975241
NCBI-ProteinID:
XP_007107625
Ensembl:
ENSPCTG00005005770
UniProt:
A0A2Y9ES03
LinkDB
All DBs
Position
18:complement(76747955..76756509)
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AA seq
535 aa
AA seq
DB search
MLPSQAGAAAALGRGSALGGSLNRTPTGRPGGGGGGGTRGANGGRVPGNGAGLGPGRLER
EAAAAATTTPAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSEMELGVVVGGPEAAA
AATGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKKPRLLPV
GCGTLLGVRMLPMGPSLKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKA
LIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDTLKPAFTVTNLP
GTTSTIQTAPSTSTTMQVSSGPSFPITNYLAPVSASVSPSAVSSANGTVLKSTGSGPVSS
GGLMQLPTSFTLMPGGAVAQQVPVQAIQVHQAPQQASPSRDSSTDLTQTSSSGTVTLPAT
IMTSSVPTTVGGHMMYPSPHAVMYAPTSGLADGSLTVLNAFSQAPSTMQVSHSQVQEQGG
VPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQAGSSSNLTELQVVNLDAAHSTKSD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaagctggggccgcggcggcgctgggccggggctcggccctggggggc
agcctgaaccggaccccgacggggcggccaggcggtggaggcggcggcgggactcgcggg
gctaacgggggccgggtccccgggaacggcgcggggctcggcccgggccgccttgagcgg
gaggctgcagcagcagcgacaaccaccccggcgcccaccgcgggggccctctacagcggc
agcgagggtgactcggagtcgggcgaggaggaggagctgggcgcggagcggcgcggcctg
aagcggagcctgagcgagatggagctcggcgtggtggtcggtgggcccgaggcggcggcg
gcggccacagggggctacgggccggtgagcggcgcagtgagcggggccaagccgggtaag
aagactcggggccgcgtgaagatcaagatggagttcatcgacaacaagctgcggcgctac
acgaccttcagcaagaggaagacgggcatcatgaagaagaaaccaaggctgcttccagtg
ggttgtggaactttgttgggagtgaggatgctacctatggggccatccttgaaggcctat
gagctgtccacgctgacagggacacaggtgctgttgctggtggccagtgagacaggccat
gtgtatacctttgccacccgcaaactgcagcccatgatcaccagtgagactggcaaggca
ctgattcagacctgcctcaactcgccagactctccaccccgctcagaccccaccacagac
cagagaatgagtgccacgggctttgaagaaacagatctcacctaccaggtgtcggagtcc
gacagcagtggggagaccaaggatacactgaaaccggcctttactgtcaccaacctgccg
ggtaccacctccaccatccagacagcacccagcacctctaccaccatgcaagtcagcagc
ggcccctcctttcccatcaccaactacctggcaccagtgtctgctagcgtcagccccagc
gctgtcagcagtgccaacgggactgtgctgaagagtacaggcagcggccctgtttcctct
gggggcctcatgcagctgcctaccagcttcaccctgatgcctggtggggcagtggcccag
caggtcccagtgcaggccattcaggtgcaccaggccccacagcaagcgtctccctctcgc
gacagcagcacagacctcacgcagacctcctccagcgggacagtgacgttgcccgccacc
atcatgacatcatctgtgcccacaactgtgggaggccacatgatgtaccccagcccccat
gcagtgatgtatgcacccacctcgggcctggctgatggcagcctcaccgtgctcaatgcc
ttctctcaggcaccatccaccatgcaggtgtcccacagccaggtccaggagcaaggtggc
gtcccacaggtgttcctgacagcgccatctgggacagtgcagatccctgtttctgcagtt
cagcttcaccagatggctgtgatagggcagcaggccgggagcagcagcaacctcaccgaa
ttacaggtggtgaacctggatgccgcccacagcaccaagagtgactga
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integrated database retrieval system
