KEGG   Physeter macrocephalus (sperm whale): 102975307
Entry
102975307         CDS       T06011                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X2
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03018  RNA degradation
pcad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102975307
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102975307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102975307
   03041 Spliceosome [BR:pcad03041]
    102975307
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102975307
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     102975307
Spliceosome [BR:pcad03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    102975307
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 102975307
NCBI-ProteinID: XP_007121571
Ensembl: ENSPCTG00005011854
UniProt: A0A2Y9FFF7
LinkDB
Position
16:56931245..56932412
AA seq 131 aa
MLHLWLLKTAQNHPLLVELKNGETYNGHLVSCDNWTNINLREVICKSRDRDKFWLMPECY
LRSSTIKYLRIPDEIIDTGREEVAAKGCGCGGRQQQKRQKGHGTGCAGRGGIPGTSRDQP
ERRPGREAGKQ
NT seq 396 nt   +upstreamnt  +downstreamnt
atgcttcacttgtggctgctgaaaacggctcagaatcacccattgttggtggagctcaaa
aacggggagacgtacaatgggcatctggtgagctgtgacaactggacgaacatcaacttg
cgtgaggtgatctgcaagtccagggacagggacaagttctggctgatgcccgagtgctac
ctccgcagcagcaccatcaagtacctgcgcatccccgatgagatcatcgacacgggcagg
gaggaggtggcggccaagggctgtggctgtggtggccggcagcagcagaagcgacagaag
ggccatggcacggggtgtgccgggagaggagggatcccagggaccagcagagatcagcca
gaaaggaggccgggcagagaggcgggcaaacagtga

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